KEGG   Ictalurus furcatus (blue catfish): 128622053
Entry
128622053         CDS       T09387                                 
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128622053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128622053
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ifu04812]
    128622053
   04147 Exosome [BR:ifu04147]
    128622053
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     128622053
Cytoskeleton proteins [BR:ifu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     128622053
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128622053
  Exosomal proteins of other cancer cells
   128622053
SSDB
Motif
Pfam: Filament FPP GAS SlyX DUF1359 DegS Phage_GP20 CENP-F_leu_zip GIT_CC TSNAXIP1_N FapA bZIP_1 DUF5660 TSC22 DUF1664 ZW10_C2 ZapB ADIP Laminin_II DUF3450 Baculo_PEP_C bZIP_2 APC_N_CC DUF3141 CCDC138_cc COG3_N Spc7 YabA
Other DBs
NCBI-GeneID: 128622053
NCBI-ProteinID: XP_053504222
LinkDB
Position
18:18771647..18773764
AA seq 421 aa
MRGSCYSQKTVSGSSRMRVQSPSPSRCRASSSSSVARGRAGLQGGAVEIGTELHQHHANE
KEEMQLLNARFAGYIEKVQALEQRNAALREELQSLQSRYKAGPGGLGEEYEAKFKEMKDL
IAALTAEKGAADIERGYAEEEVELWTMKLEEELALKEEAEMILREFREDVDNATLQKSDL
ERRVEQLVAEIEFLKKLHSEEVAELMKQIEESKVTVELDSDRPDLAAHLRKTRAEIEAVA
ARNVQEAEKWYKGKFDTLKESAAKRETQMTTMREEISTLSSEASDLQNQIDALRAKNAAL
EQQLDDMEASHLDKMSNLEAIIAQLENQLCETKMEMGKYLTDYQELLNIKLKLDAEIATY
RKLLEGEEKRLGISVSESTAGRVTLNLNHHYQVFLLKCYYFKSLSKILPHWFFRWLIVLA
F
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagaggaagctgctattctcagaaaacagtgagtgggtcgagcaggatgcgggttcag
agcccgtctccgtcccgctgcagagcttcttcgtcctcctcggtggcccgtggacgtgcc
ggtctccagggaggtgccgtggagatcggcacagagcttcatcagcatcatgcaaacgag
aaggaggagatgcagctacttaacgcacggtttgccggctacattgagaaggttcaggct
ctggagcagaggaacgcggcgctcagggaggagctgcagagcctgcagagccgatacaag
gcgggaccggggggattgggtgaggagtacgaggccaagtttaaggaaatgaaggacctg
atcgcagcactgacggctgagaaaggagcggctgatattgagaggggatatgcggaggag
gaagtggagctctggaccatgaagctggaggaagagcttgcacttaaagaggaggcagag
atgatcctgcgtgagttccgtgaggacgtggacaacgccacgctgcagaagtctgacctg
gagagacgtgtggagcagctggtggctgagatcgagttcctgaagaagctacacagtgag
gaagtggccgagctaatgaagcagatcgaggagtcgaaggtgacggtggagctcgactcg
gatcggcccgatttagccgctcacctgcgcaagacgcgtgccgagatcgaagctgttgct
gcgcgcaacgtccaggaggcggagaagtggtacaaagggaaatttgacacgctgaaggag
agcgccgccaaacgtgagacccagatgaccaccatgagggaagagatcagcactctgagc
agcgaagcgtccgacctgcagaaccaaatcgacgccctcagggccaaaaacgccgctctg
gaacaacagctggacgacatggaggcgtctcacctggacaagatgtccaacctggaggcc
atcatcgctcagctcgagaaccagctgtgtgaaaccaagatggagatgggcaaatacctc
actgactaccaggagctgcttaacatcaaactgaagttagacgctgagatcgccacctac
aggaaacttctggaaggagaagagaagcgactcgggatctcagtcagcgagagcacagca
ggtagagtcacgctaaacctaaaccatcactaccaagtgttcttactaaaatgttactat
tttaagtctttgtctaaaattcttcctcactggttctttagatggttaatagttctagct
ttttaa

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