Ictalurus furcatus (blue catfish): 128622080
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Entry
128622080 CDS
T09387
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128622080 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128622080 (dkc1)
03032 DNA replication proteins [BR:
ifu03032
]
128622080 (dkc1)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
128622080 (dkc1)
Prokaryotic type
128622080 (dkc1)
DNA replication proteins [BR:
ifu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
128622080 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Motif
Other DBs
NCBI-GeneID:
128622080
NCBI-ProteinID:
XP_053504268
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All DBs
Position
18:24076668..24083213
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AA seq
538 aa
AA seq
DB search
MRRFRHAQTLPRVPRRRTRRKMADCEFSSAKKEKKKKAKISDDEVGEIQETGDFLIKPES
KVAKLDTSQWPLLLKNFDKLNIRTAHYTPLPHGSNPLKRNINDYVRSGFINLDKPANPSS
HEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGIVRLHNA
IENEHQLARTLECLTGALFQRPPLIAAVKRQLRVRTIYESKLIEYDPEKRLGIFWVSCEA
GTYIRTLCVHLGLLLGVGGQMQELRRVRSGVLGEMDCMVTMHDVLDAQWQFDHNKDETYL
RRVIFPLEKLLISHKRIVMKDSAVNAICYGAKIMLPGVLRYEDGIELNQDIVVITTKGEA
ICTAVALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKRG
KPNGSTPADWKEGYVDYSSKPKVKVEAAAEDGDAVQAGAKRKRDESGSEGEAVPSTPKTD
EVKKEKKKKKKEKKMKLAEEVSEAAEATEDAAAEGEGEVTESAKKKKKKKKVKEADSD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtttcagacatgcgcagacactcccacgtgttcctcgcaggcgcacaagacgg
aagatggcggactgtgaattctcttctgctaagaaagagaagaagaagaaagcgaagatt
tcagatgacgaagtcggggaaatccaagaaacgggagatttcctcatcaagcctgaatcc
aaggttgccaaacttgacacatcccagtggcctttgctgctcaagaattttgataagctg
aacatcaggacagcgcactacacacccctgccccatggctcgaatcccctgaagaggaac
attaacgattacgtcagatctggttttattaacttggacaagccagcaaatccgtcctct
catgaagtggtcgcgtggatcaaacggatcctgcgtgtggagaagacgggccacagcggg
acgctggacccaaaagtcacgggctgtctgatcgtgtgcatcgacagagcgacgcgatta
gtcaaatctcagcagagcgcaggcaaagagtacgtgggcatagtacggctgcacaatgcg
atagagaacgaacatcagctcgcgaggactctggagtgtctcaccggagcgctgttccag
aggcctcctctcatcgccgcagtgaagcgacagctacgagtcaggaccatctacgagagc
aagctcatcgaatacgacccggagaaaagactcggtattttctgggtaagctgcgaggca
gggacgtacatcagaacgctgtgtgttcatctggggctgctgctgggagttggaggtcag
atgcaggagctcaggagggttcggtctggagtgttgggcgagatggactgcatggtgacc
atgcacgacgtattagacgctcagtggcagtttgatcacaacaaggatgagacctacctg
agaagagtcatcttccctctggagaagctgctcatcagccacaagaggatcgtcatgaag
gacagcgcggtcaatgctatttgctatggtgctaaaatcatgttaccgggtgtgctgcgg
tatgaagatggcatagaactgaaccaggacatcgtcgtcatcacgactaaaggagaagcc
atttgtacagctgtagcactgatgacgacggcggtcatctctacgtgcgaccacggcgtc
gtggctaagatcaagagggtcatcatggaaagagacacgtacccacgcaaatggggcttg
ggtccaaaggccagtcagaagaaaatgatgatccagaaaggccttctagataaacgcggc
aagccgaacgggagcactccggccgactggaaggagggttacgtggactacagcagtaaa
cccaaagtaaaggtagaagcagctgctgaagatggtgacgctgttcaggcaggagcaaag
aggaaacgcgatgagagcggaagcgagggcgaagccgtgccctcgaccccaaagacggac
gaggtcaagaaagagaagaagaaaaagaagaaagaaaagaaaatgaagctggctgaggag
gtatcggaagcagcagaagccaccgaggacgcagcggcagaaggggaaggagaggtcaca
gaaagcgccaaaaagaagaagaagaaaaagaaggtgaaagaggctgattcggactga
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