KEGG   Ictalurus furcatus (blue catfish): 128622192
Entry
128622192         CDS       T09387                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128622192 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ifu01009]
    128622192 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ifu03021]
    128622192 (ell2)
Protein phosphatases and associated proteins [BR:ifu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128622192 (ell2)
Transcription machinery [BR:ifu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     128622192 (ell2)
    Little elongation complex (LEC)
     128622192 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 128622192
NCBI-ProteinID: XP_053504481
LinkDB
Position
18:complement(5041172..5064913)
AA seq 661 aa
MAALSEDGRYGLNCGRNADRITVLHVKLTETAIRALENYRNCKNVPSSQPTIHFQGLQGV
GGHLTPRCALPVRLYDVEVRLFHTEDNQGTRTRQLQKRIKIPKSDVSDGSHIFDFYLSNV
GKDNPQGSFECIQQHVPSSGVPHLSSLGAIQDKITVCATNDSYQVTRERMTQAEEDTRKR
GTKVIKPGGQFRGAKVQIRKPAPSAPDPVPERKRSTPMNPANTIRKCLTNNPVSQRPYRE
RIIHLLALRSYKKLEVLARLQRDGISQKDRNSLGSTLQQVANLNPKDNSYSLKDFIYREV
QRDWPGYSEDERVQLDRILARKLGLPADSLSSSSSPKEPSSPQKRQPQGDFIDPLMSKKP
RISHLSSRGASSSSDRRLPTETEEKRPAPPVNAACPGPSSQPPVSHPPSGSNSNSPSTPE
GRGTQDLPLDQSSTCGEETEPYATRSVTPSSNFLPASATSPAANSSKKPKKKSKKHKDKE
RERRAEDENARHREGPAEKEDRPRKRHRIEAGKHSPANVDSSSDADLHREDRTSKPELTE
LPTPVIPDYIAKYTAVVSMDQRQCYKDDFNGEYDEYRTLHARVENITRRFTQLDAQCRRL
LPGTKEYQEVHEEVLQEYKKVKQHNPNYHEEKQRCEYLHNKLAHIKRLIADFDQRRAQSW
R
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggccgctctctccgaggacgggagatacggactcaattgcggccgcaatgccgacaga
atcaccgttctgcacgtaaaacttaccgagacggccatacgagcgctagaaaactaccga
aactgtaagaatgtaccgtcctcacagccaacaatacatttccaaggactgcaaggggta
ggtggacacttaacaccaagatgtgcgcttccagtgcggctatatgatgtcgaggtccgt
ctttttcacactgaggacaaccaagggactcgtacacgacaattacaaaagcgcatcaag
attccaaagtcggacgtctcagatggatctcacatcttcgatttctacctgtccaatgtc
ggcaaggacaatcctcagggaagctttgaatgcattcagcagcatgtgcccagctctggg
gtcccccacttgtcctctctgggggcgatccaggacaaaatcacagtgtgcgccaccaac
gattcctaccaggtgaccagagagcgcatgacgcaggccgaggaggacacgcgcaagagg
ggcaccaaggtcatcaaacctggagggcaattccgaggtgcaaaggtgcagatccgaaag
ccagctccgtctgcccccgacccggtccccgagaggaaacggtcgacccccatgaaccca
gccaacaccatccgcaagtgccttaccaacaacccagtgtcccagcggccataccgggag
cgcatcatccacctgctggctctgcgctcctacaagaagctggaagtcttagccaggctg
cagcgagatgggatcagccaaaaggaccgcaattcgctggggagcaccttacagcaggtt
gccaatctgaacccaaaggacaactcgtactccttaaaggacttcatttaccgtgaggtc
cagagagactggcccggctactctgaggacgagcgcgttcagctagaccggatcttggct
cgtaaactgggcctgcctgcagattcactctcatccagcagttctccaaaagaaccatca
tcaccacagaagcgccagcctcagggtgacttcatcgaccctctgatgtccaagaaaccc
cgtatctcccacctcagcagccgaggagcttcaagctcgtcggatcgccgcctgcctaca
gaaaccgaggagaagagaccggctcctccagtgaacgcagcctgcccaggcccttcgtcc
cagcccccggtgtcccaccctccatccggctcgaactccaactcgcccagcacgcccgag
ggccgcggaacccaggacctgcccctggaccagagctccacatgcggggaggagacggaa
ccctacgcaacccgctccgtcactcccagctccaactttctcccagcttccgccacatcc
ccagcagccaacagtagcaaaaagcccaaaaagaagtcgaagaagcacaaagacaaagag
cgggagaggagagcggaggacgagaacgcacggcacagggagggaccggctgagaaggaa
gacaggccgagaaagaggcaccgcatcgaggcaggaaaacactcgccagctaacgtggac
agctcttcagatgcagacctgcaccgagaagacagaacaagcaaacctgagcttactgaa
cttcccacaccagtgatacctgattacatagctaaatacactgcggtagtgtctatggat
cagaggcagtgctacaaggatgactttaacggcgagtacgatgaatatcgcactcttcac
gctcgtgtggagaacatcacacggcgcttcacacagctggacgctcagtgcagacgcctg
ctacccggaaccaaagagtaccaggaggtgcacgaagaggtgcttcaagaatacaagaaa
gtcaagcaacacaacccgaattaccacgaagagaagcagcgctgcgagtacctgcacaac
aagctggcccacatcaagaggctcattgctgactttgaccagcggagggcgcagtcctgg
cgttaa

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