Ictalurus furcatus (blue catfish): 128622282
Help
Entry
128622282 CDS
T09387
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128622282 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128622282 (nup98)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128622282 (nup98)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128622282 (nup98)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128622282 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128622282
NCBI-ProteinID:
XP_053504631
LinkDB
All DBs
Position
18:23616739..23633683
Genome browser
AA seq
1806 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGASSTFGQQNTAFGTTGGFGASAFGTTNNTGGLFGAAQNKPAG
LFGSSTFSQPVTSSTSSGFGFNATSGGTSNSLFGSTNTGSGGLFSQPGNAFSANKPASFG
TFGTSTSSGGLFGTTNTTSNPFGGTSSLFGSSGFTATQPGTTIKFSPPTGSDTMVKSGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAANAGGLFGAAATPTPSTAT
GLFGSSGTGFSFNQPKPSFSASAGGFGPTPGGLFGQSSQANSLFKPFGQTTTTQNTGFSF
GATNTMGSANTSSMGLFGNTAASQTGGLFGNTANTSTATGFGTSTGLFGQPNTGFGNVGT
QNLFGNKPAGFGTTTTSAPSFGTGTGLFGNKPTLTLGPNTNTSTFGFGANPPGVSLFGNK
PATGTLGTGLGTGFGAGTGQTSLFGNNQNKISSTLGTVGTFGGTNFNTGTSMLNFGAPQQ
PVALTDPNAAAQQAALQQQLNALNYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQKALT
TPTHYKLTPRPATRVRPKALTSSGSGKSQLFDGLDDDEPSLTNGAFMPRRSIKKLVLKNL
NGSSLYSSPLNREADDLNSPSEYPQNGLSLRADAEETHDVDGGAEDDLQVSRFYTNPVAK
PIPHTQPSPSLQDTISELNMRRSAGVRKDLDLSSEEISLGDESVQEERDEELEAQKPPHP
AGIVLTRVGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFPGEVNLTDLNLDEI
VHLRRKEVIVYPDDKDKPSVGEGLNRRAEVTLDGVWPNDKTTCTQIKSPQRLSEMNYEER
LENVSRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDIPPAKTEAKKMKTAVPAG
LQQIPLSQQHQQMAPQAQSKAVLELLSRVSELDSDMADITQEPPADGVLFDEDDCVLEDD
TRMALRAATPAEPEPISASSQIASSLGINPHTLQIMKASLFVGDDDCDLFHEQFPPKFLE
EVSSPSRLLLGKSQARLSVGGLLQSKFTSAGGLFSQLPELPFGGSPQKLSKSAVPEASWP
SLGTSIVLPPPAPELMPRTVGARRLGGPVPLENSVTVGKGRLLMDAALYMGRSFRVGWGP
NWTLVHCGDHLSTPAESKDQNKDAMGFGFLPRPSKNRQIAESPFKVHVEQVVGMEPKETA
ESLAMYHQPLEIGLEHSTFSTDDACPFIQPEKGVNALHEYAKWIVEVLKKGGAGDAVLGH
WQQVWTLCEALWGRLGDRDSEPEVGGGYQDRHARRRSFSRWLSESAAQRIQEEVCRNQTR
CHVDAIFSYLTGHCISEACRLAQKNGDHRLSLLLSQAAGSQFSRDLLALQLADWNRMQTD
SFIQEERLHIFALLAGKPVWETTDCCINVCSELDWKRCLAVHLWYMLPPTASVADSLAKY
EAAFQGSEDGRKYACAPLPPYMDDVEQEAVEEMEETESTKALYDICFHLLKLYSDKHYSL
HQLLDPTTVTADQLDYRLSWHLWNVLQALNYTHLSLPRQSLLHTSYAAQLESVGLWEMAV
FVLLHIPDSLLRERAVREILNQHCALEETDESAEKERFLTDKLLIPMQWIHEAKATRARR
DGDQHREALHLFRAGHWNRCHRLIIQNLASDCIVNDNHEYLKEFLEGLAVPELSVQIQDW
DTSGRVYLDYIRVIQSLKTIQKADSPGFQLERLHNNVTSLCSRIELLPCFKAKDRLAQSE
MAKRLANILRAVLSLQQGGEGAPDPRRIPLCHLAPHIGRLPMPEDYALEELRSLTQSYLR
EYVVSH
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtctttcggtgctcccttcgggggaggaacaggaggatttggggcttca
tctacattcgggcaacagaacacagcgtttggaactacaggtggttttggtgcttctgct
tttggaaccacaaacaacaccggtggtctcttcggggcagcacagaacaaacctgctggg
ctttttggctccagcacgttcagtcagcccgtcacgtcgtctacgagcagtggatttggt
ttcaacgctacaagcggcggtacctcgaacagcctctttggcagtactaatacaggaagc
ggaggccttttctctcagccaggcaatgcattcagtgccaataaacctgcctcttttggt
acttttggtacaagtaccagcagcggagggttgtttgggacaaccaacaccacctccaat
ccgtttggaggaacctcatctctgttcggatcctcaggctttactgctacccagcctggc
acaaccatcaaatttagtccaccaacaggaagtgacacaatggtaaagagcggtgtgacg
accagcatcaacaccaagcaccagtgcatcacagccatgaaggagtatgaaaacaaatct
ctagaggagctaaggttggaggattaccaggcagggaggaagggaccctccaacccaatg
gcagccaatgcaggcggcctgttcggggctgccgccaccccgactcccagcactgctacc
ggcctcttcggctcctcgggtaccggcttcagcttcaaccagcccaagccctccttcagt
gctagtgcaggtggcttcgggccaactccaggtggtttatttggccagtcgtcacaggct
aatagtctcttcaagcccttcggtcagaccaccaccacccaaaacacgggcttctcgttc
ggtgccaccaacaccatgggctcggccaataccagcagcatgggtctgtttgggaacacg
gctgcctcgcagaccgggggtctgtttggaaacacggccaacaccagtacggccactggc
ttcggcaccagcaccggactcttcgggcagcccaacaccggctttgggaatgtgggtaca
cagaatctgtttggtaacaagcctgctggttttggcaccaccaccaccagcgctccctcc
tttggaacaggcacaggcctgtttggcaacaaacccacactcaccttggggccaaacaca
aacacctccacctttgggtttggagccaatcctcccggagtaagtctgtttggaaacaaa
cctgccaccggtacactaggaactggactcgggacaggtttcggagcaggtacaggccag
acgtctctgtttggaaataaccagaacaagatcagctccactctggggacagtggggacg
ttcggcggtactaacttcaacacaggaaccagcatgttgaacttcggcgcaccgcagcaa
cctgtcgcactgacggatcccaacgctgcagcgcagcaagcagcgctacagcagcagctc
aacgcgcttaactactcgcctttcggggattcacccctttttagaaatccgctctccgac
cccaagaagaaagaggagcgcctgaagcctacaaatccagctgcccagaaagccctgaca
acccctacgcactacaagctcacccctcgtcctgccacacgtgtgcgtcccaaagccctc
acctcatcaggttctgggaaatctcagctttttgacgggctagacgatgatgaaccttct
ctcaccaacggagcttttatgcccaggagaagcatcaagaaactcgtgttaaagaacttg
aatggaagcagtctgtacagcagcccactgaacagggaggcagacgacttgaactcgccg
tcggaatacccacagaacggcctcagtctgagagcagacgcagaggaaacccatgacgtg
gatggaggagccgaggacgatctgcaagtctccaggttttacaccaaccccgttgctaag
cccatcccacacacgcagcccagtccttcgctgcaagacactatcagcgagctgaacatg
aggagatccgccggtgtccgcaaagacctggacctcagcagcgaggagatctctttggga
gacgagagcgttcaggaagagagagacgaggagctggaggcacagaaacctcctcaccca
gccggtatcgttctcactcgggtcggctactacaccatcccgtccatggaggagctgggg
aagatgctgaatgaaaacggggagtgtattgtcgagaacttcacagtcggaaggaaaggc
tacgggtctgttttcttccctggtgaagtgaatctgaccgatctgaatctcgacgaaatc
gtgcacttgagacggaaggaagtgatcgtctaccccgatgacaaagataagccttctgta
ggagagggcctgaacagacgagcagaagtgaccctcgacggcgtttggccgaacgacaaa
accacctgcactcagatcaaaagtcctcagcgtctgagcgagatgaactacgaggaacgc
ctggagaacgtctctcgcaaacaaggtgctcgcttcctggagtacagacctgagaccggc
tcctgggtatttgaggtggcccacttttccaagtatggcctgcaagactcggacgaagac
gaagacatccctccggctaaaacggaggcgaagaagatgaaaacggccgtcccggcggga
ctgcaacaaatcccactttcccaacagcatcagcagatggcgccacaagctcagagtaag
gcggtactggagcttctgagccgcgtgtcggagctggacagcgacatggcggatattacc
caggagcctccagcagacggagtgttgtttgacgaggacgactgcgtgctggaggatgac
acaaggatggccctaagagcggcgacccctgctgagccggagcccatctctgcctccagt
cagatcgcctcctcgttaggaatcaacccacacactcttcagattatgaaggcgtccctg
tttgttggtgatgacgactgcgacctgtttcacgagcagttccctccgaaattcttggag
gaggtgtcgtctccttcgcggcttttactcggtaaatcccaggccaggctatcagtgggc
ggccttctgcagagcaagttcacctcggccggagggctcttttcgcagctgccagagctt
cctttcggagggagccctcagaagttgagtaagtcagcagtaccagaagcttcgtggccg
tcactgggcacctccatcgttttacctcctcctgcccctgagctcatgccgaggactgta
ggagcacgcagactgggcggccccgtgcctcttgaaaactctgtcaccgttggaaaaggc
cgtctgctgatggacgcggcgttgtacatgggccgctcgttcagggtgggatgggggcct
aactggacgctagtgcattgtggggaccacctcagcacacctgcggagtcgaaggatcag
aacaaagacgccatgggcttcggcttcttgcccagacctagcaagaaccggcagattgct
gaaagcccctttaaagtacatgtggagcaggtggtgggcatggagcccaaggagactgcg
gagagcctggccatgtaccaccagccgcttgagatcgggctcgagcacagcacattcagc
actgacgatgcctgccccttcatccaaccggagaaaggagtgaatgctctgcacgagtac
gccaagtggatcgtggaggtcctgaagaagggcggagctggagacgctgtactcggtcac
tggcagcaagtatggactctgtgtgaggctctgtggggacggctcggagatcgggactcg
gagccggaggtcggcggaggttaccaagaccgacacgcgagaaggcgcagtttctcccgc
tggctgtctgaaagcgctgcccaacgcatccaggaagaagtgtgtcggaatcagacacgc
tgccacgtcgacgccatcttcagctacctgaccggccactgcatcagtgaggcttgcaga
ctggcccagaaaaatggagaccatcgtctgtccctgctgctgtcccaggctgcggggtct
cagttcagcagagatcttttggccctccagttagcagactggaaccgaatgcagacggac
tctttcatccaggaggagagactgcacattttcgccctactcgctggcaaacccgtttgg
gagacgacagactgctgtataaacgtgtgctcggagctggactggaagcgctgtttggct
gtgcatctgtggtacatgctgcctcctacggcctccgtcgcagactctctagccaaatac
gaagccgcctttcagggttcggaagatggaagaaaatatgcctgcgctcctctcccgccc
tatatggatgatgtagagcaggaagctgtggaagagatggaggaaacagaatctacaaaa
gcgctctatgacatctgtttccatctgcttaagctttacagtgacaagcactacagcctg
caccagctgctggaccccactacagtgactgcagatcagctggactacaggctaagttgg
cacctgtggaatgtgctacaagccctgaactacacccacctgtcactgccacgccagagt
ctcctccacactagctacgctgcccagctcgagagcgtgggcctgtgggagatggctgtt
tttgttctgctgcacatccctgactcattgcttcgagagcgtgctgtgcgggagatcctg
aaccagcattgtgccctggaggagactgacgagtccgcagagaaggaacgcttcctcact
gacaagctgctcatccccatgcagtggatccacgaagccaaggccacccgggcacgcagg
gacggagaccagcaccgtgaagcgctgcacctcttcagggccggacactggaaccgctgc
caccggctcatcatccaaaacctggcttcagactgcatcgttaatgataatcacgagtat
ctcaaggagtttctggaaggcttggctgtgcctgagctcagcgttcagatacaggactgg
gacacgtccggacgcgtctatctggactacatccgcgttattcagagcctgaaaaccatt
cagaaggcggacagcccaggattccagctggagcggctacacaacaacgtgacctcactg
tgcagcaggattgagctccttccctgtttcaaagccaaagacagacttgcccagtcagaa
atggccaaacgtctggctaacatcctgcgtgcggtgctaagccttcagcagggtggagag
ggcgctccggatcctcgccgcatcccgctgtgccatctcgcaccccacatcggacgctta
cccatgcccgaggactacgctctggaagagctccgcagcctcacccagtcttatctacgc
gagtatgtcgtcagtcactga
DBGET
integrated database retrieval system
