Ictalurus furcatus (blue catfish): 128622418
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Entry
128622418 CDS
T09387
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128622418 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128622418 (zmat2)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128622418 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
128622418 (zmat2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
SNRNP27
DUF4250
MG280
Cgr1
C2H2-zf_KIN17
Herpes_gp350_A
zf-C2H2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
128622418
NCBI-ProteinID:
XP_053504874
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All DBs
Position
18:14565606..14572113
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AA seq
198 aa
AA seq
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MASSSGAKNDFRRKWDKDEYEQLAQKRITEEREKKDGKPVPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEINKKKLEEKQKEYDFEERMKELREEEEKAKAYKKEKLKEKKRKAEEDLNFEDDD
EMAAVMGFSGFGSSKKGH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcagtggtgcaaagaatgattttcggcgcaagtgggacaaagatgagtat
gaacaactggctcagaagcgaatcacggaggaaagagagaaaaaagatggcaaacctgtc
cccccagtcaaacgagagctcctccggcacagagattacaaggtggatttggagtctaag
cttggaaagaccatcgtcatcactaagaccacaccacaggctgagatgggcgggtactat
tgcaatgtttgtgattgtgttgtgaaagactccatcaactttttggatcacatcaatggc
aagaaacatcagaggaacctgggaatgtcgatgcgagtggaacgctcatcgttggaccaa
gttaaaaaacgtttcgagattaacaaaaagaagctggaggaaaaacagaaggagtatgat
ttcgaggagcgaatgaaggaattgcgggaagaggaggaaaaagcaaaagcatataaaaag
gagaagctaaaagaaaagaaaagaaaggcagaggaagaccttaattttgaagatgatgat
gaaatggctgctgtaatgggattctcagggtttggttcctccaaaaagggccactga
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