Ictalurus furcatus (blue catfish): 128622432
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Entry
128622432 CDS
T09387
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128622432 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128622432 (myo5b)
04131 Membrane trafficking [BR:
ifu04131
]
128622432 (myo5b)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128622432 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128622432 (myo5b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128622432 (myo5b)
mRNA cycle factors
P-body specific factors
128622432 (myo5b)
Membrane trafficking [BR:
ifu04131
]
Others
Actin-binding proteins
Myosins
128622432 (myo5b)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128622432 (myo5b)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128622432 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
MYO6_lever
nSTAND3
NPHP3_N
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
128622432
NCBI-ProteinID:
XP_053504909
LinkDB
All DBs
Position
18:18028868..18101236
Genome browser
AA seq
1814 aa
AA seq
DB search
MTTDQELYVKYTRVWIPDPEEVWKPAEIIKDYKEGESVLHLKLEDESTLPYPIGPKDNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSASDANVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLALNSAEDFTYTSLGQNIVIPGV
NDAVDLEKTREALTMLGVKESHQMSIFKIIASILHLGNVDIVSERDKESCHISRNDPHLL
HFCELLGIEQDQMENWLCHRKLATATETYVKNMSSAQANTARDALAKHIYAHLFDWIVEH
INKALHTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWVQKLYSRHTSSEHFE
KPRMSNTSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVAELFQDEKGAP
VSAGKTSKINVRPAKPMPKSHNREHRKSVGTQFRSSLHLLMETLNATTPHYVRCIKPNDV
KEAFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDVTTDKKQV
CRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKMQKTVRGWLQRRRY
QKIRKSTILLQRYGRGFLARRYAELLRLTRAALICQKQYRMVRVRKAYLTIRKATITIQA
FTRGMFTRRLYQEYLLHHKASVIQRTVRGWLQRRKFLRARNAAVVLQCAYRRVLAKRQLK
QLKIAARTAEHFKDLNVGMENKIVQLRRKMDTQKHEYKVQSEKLSEANTALVTEVSKLQK
ELETARNRKGETTQLSSLQDELEKLRAELQEAHAQRKKLEEEHSTEKLGLEKRVQELERE
NSLLKEEKEAMNQKILRQSQSSGGKGGSLSQKEASLQAELDEERLRYQNLLKEFSRLEQR
YDNLQEEATYAKFVPGHRRSPSIQSSLGSDSTFPSISMSEVGDTEDTIQQVEDMGLEKAA
NDISVFMKLQKRVRELEQERKRLQTNLEKMEELGKHKAIEANSSTSEADTNADLAYNSLK
RQELESENKKLKNDLNELRKALADRASDNCSSNEPQDSYNVLLNQLKAANEELDIRKEEV
LMLKTQIVSTAKPSENTNHINSNEIIWDNSKKPVDKEEVLQGYQGLSESKRLLEAQLQSQ
NRKHKDELEALHTQIEVMKVDLEKKQEMLNHFSTLPPEALVEFSVQQEITRLTNENLDLK
EIMEKLEKNERKLKKQLKIYIKKVQELEASQAAANRPKLVRQVTVQRKEKDFEGMLEYYK
EDEALLVRMLISDMKPQDVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIKK
LLKKNSEDFEMTSFWLANTSRLLHCLKQYSGEEAFMTQNTPKQNEHCLKNFDLAEYRQVL
SDLSIQIYQQLVRIAEGMLQPMIVSAMLESGSLTGVKPMGYRNRSSSVDCDSGGPSSYTL
EVLIKQLGQFYTLMSDHGLDPEIIQQVVRQLFYCINAVSLNNLLLRKDVCSWSTGMQLRY
NISQMEEWLRGRNLHQREVMLTIEPLIQAAQLLQVKKKTSQDAEAICSMCNILSMHQIVK
ILNLYTPLNEFEERVTVSFIRDIQNLLQGRTENNQLLVDTKHTFPVLFPYTPSALSLETM
HIPASLNLDFLVRV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaccaggagctctacgtcaagtacactcgggtttggatccccgacccagag
gaggtgtggaagcctgctgagattattaaagactacaaagaaggagagtctgtcttgcac
ctcaaactcgaagatgaatcgacattgccatatccaattggtcctaaagacaacccactt
ccattccttcgaaaccctgacatactggtgggagagaacgacctcacggccctcagctac
ctgcatgaacctgcggtgctgcacaacctcaaggttcgcttcctggagtccaaccacatc
tacacctactgtggtattgtactggtggccattaatccatacgagcagctgccgatttat
ggcgaggaggtcatcaatgcctacagcgggcaaaacatgggtgacatggaccctcatata
ttcgccgtggcagaggaggcttataaacagatgggcagagatgagaagaaccagtcgatc
atcgtgagtggagagtcaggagctgggaagacagtctctgccaaatacgccatgcgctac
ttcgctactgtgggaggatccgccagtgacgcgaatgtggaggagaaagtgctggcgtcc
agccccatcatggaggctatcggaaatgcgaagacgacacgtaacgacaacagcagccgc
ttcgggaaatacatccagatcggctttgacaggaggtatcacatcatcggtgccaacatg
cgcacgtatttgctggagaagtccagagtggtgtttcaggctgaggatgaaaggaactac
cacatcttctaccagctgtgtgcctctgcctcgctccccgagttcaaagacctggccctg
aacagtgcagaagacttcacttacacctctctgggtcagaacatcgtcattccgggggtt
aatgatgctgtggacttggagaagacacgggaagccctgaccatgctgggtgtgaaggag
agccatcagatgagcatcttcaagataattgcctccatattgcaccttgggaacgtggac
atagtttctgagagagataaagagtcatgccatatctccagaaacgaccctcaccttctc
catttctgtgagctgctggggatcgagcaggaccagatggaaaactggctgtgccataga
aagttagccacggcaaccgagacctacgtgaaaaacatgtccagcgcccaggctaatacg
gcccgtgacgctctggccaaacacatatacgcccatttgttcgactggatcgtggagcac
atcaacaaagccctgcatacctccaccaaacagcactccttcatcggagtgttggatatc
tatggatttgaaacgtttgagattaacagcttcgagcaattctgcatcaactacgccaac
gagaaacttcagcaacagttcaactctcatgtttttaaactggagcaagaggagtacatg
aaggagcaaatcccatggacactcatcgacttttacgacaaccagccttgcattgaccta
atcgaggccaagctcggtatcctggacctgctggatgaagagtgcaaggtacctaaagga
accgatcagaactgggtgcagaagctgtacagccgccacacaagcagcgagcacttcgag
aagccaagaatgtccaacacgtcgttcatcgtggtccactttgcggataaggttgagtat
cagtgtgatggtttcctggaaaagaacagggacacagtgtatgaagaacagatcaacatc
ctgaaggccagcaagttccagctggtggcagagctcttccaggatgaaaaaggagctcct
gtttcagcaggaaaaacctccaagatcaacgtacgtcctgctaaacccatgcccaaaagc
cacaaccgcgagcaccgcaaatctgtaggcactcagtttcggagttccttacatcttctg
atggagactctgaatgctacaactccgcactacgtacgctgcataaaacctaacgatgtc
aaagaagcctttgtgtttgattccaaaagagccgtccagcagctacgagcatgtggtgtt
ctggagaccattcgcatcagtgctgcaggatatccatccaggtggacgtacccagatttc
tttaacagataccgggtgctgatgaagaagaaagacgtgaccactgataagaagcaggtg
tgcagaaacctgctggagactctggtcaaggacccagataagttccagttcggaaagact
aagatcttcttccgagccggtcaggtggcgtacctcgaaaagctcagagccgacaagttc
cgcttcgcctgcattaagatgcagaagacagtgcgaggatggctgcagaggagacgctac
cagaagatccgcaagtcaaccatcttgctgcagagatacggccgtggcttcctggcgcgc
aggtatgcagaactgttgcgtctcacccgagcagctcttatctgtcagaagcagtacagg
atggtgagggtacggaaagcgtatctgaccatccgcaaggctacaatcaccatccaggcc
ttcacacggggcatgttcacacgccgcctgtaccaagagtacctgctgcaccacaaggcc
agtgtcatccagagaacagtgcgcggatggctgcagaggaggaagttcctccgtgcccga
aacgcagcagtggtgctgcagtgcgcttacaggcgtgtactcgccaagcgacagctgaaa
cagctgaagatcgcggctcgcacagcagaacatttcaaggatctcaacgtcggcatggaa
aataagattgtccagcttcgaagaaagatggacactcagaaacacgagtataaggtgcag
agtgagaagctgtccgaagccaacaccgcgttggtcacggaggtcagcaaactgcagaag
gagctggagacggcacgcaatcgtaaaggcgagaccacgcagctgagctcactgcaggac
gagttggagaaactgagggcggagctccaggaggcacacgcccaaaggaaaaagctcgag
gaggagcacagcactgagaagctgggactggaaaagagagtccaggagctggagagagaa
aactctctgctgaaggaggagaaagaagcgatgaaccagaagatccttcgccaatcgcag
agctccgggggtaaaggtggcagtttgtctcagaaagaggctagtctacaggctgagttg
gatgaagagagactgcgctatcagaatctgctgaaggagttttccagactggagcagaga
tatgacaaccttcaggaagaagccacttatgccaaatttgttccaggccatcggagaagc
ccatccatccaaagcagcttgggctctgactccacattcccctccatctctatgtctgag
gtgggagacactgaggacaccattcagcaggtggaggacatgggactggagaaggcagcc
aacgacatcagtgtattcatgaagctgcagaaaagagtacgagagctggagcaagagagg
aagagactccagaccaacctggagaagatggaggagctcggcaagcacaaagcgattgaa
gcaaatagctcaacgtcagaggcagacacaaatgcagatctggcctacaacagtctcaag
aggcaggagctggagtctgagaacaagaagctgaagaacgacttgaatgaactcaggaag
gcactggcggaccgggcctccgataactgctcgtccaatgaaccgcaagacagctacaat
gttctgctcaatcagctcaaagcagccaatgaggaactggatatacgcaaagaggaggtt
cttatgctaaaaacacagatagtcagcaccgccaagccatcagaaaacaccaatcacatt
aactccaatgaaatcatatgggacaacagcaaaaagcctgtggacaaggaggaggttttg
cagggctaccagggactcagtgagtccaagaggctgctggaggcacagcttcaatcccag
aacaggaagcacaaggatgagctggaggctctgcacacgcaaatcgaggtgatgaaggtg
gatctggagaagaagcaggagatgctgaatcacttcagcacgctgccccccgaagccctg
gtggagttcagcgtccagcaggagatcacacgcctcaccaacgagaacctggacctcaag
gagatcatggaaaagctggagaaaaatgagagaaaactgaaaaagcagctcaagatctac
atcaagaaagttcaggagcttgaagcatctcaggcagcggcgaatcggcccaagctggtc
aggcaggtcacagttcagaggaaggagaaggactttgagggcatgctggagtactacaaa
gaggacgaggccctgctggtcaggatgcttatcagcgacatgaagccccaggacgtttct
gctacagtaccttgtctcccagcgtacatcctcttcatgtgcatccggcatgcagactac
atcaacgatgaccagaaagtgcactccctgctcacctccaccattaacgctatcaagaaa
cttctcaagaaaaacagcgaagactttgagatgacatctttctggctagctaacacgagt
cgactcctgcactgcctgaaacaatacagtggagaggaggcattcatgacccagaacaca
ccaaaacagaacgagcactgcctgaagaactttgacttggctgagtaccgacaggttctg
agtgacctgagcatccagatctaccagcagctcgtcagaatagctgagggcatgctgcag
cccatgatcgtgtcggccatgctagagagcggcagtctgactggagtgaagcccatgggc
tacaggaaccgctcctccagtgtggactgtgacagtggaggcccatcaagctacacgctg
gaggttttgatcaagcagctcggtcagttctacacactcatgagtgaccacgggctcgac
cctgagatcatacagcaggttgtgcgccagctcttctactgcatcaacgctgtctcactt
aacaacctgctgctgcgcaaagacgtgtgctcctggagcaccggcatgcagctcaggtac
aacatcagtcaaatggaggagtggttgaggggacgaaatcttcaccagagggaagttatg
ttaaccatcgagcccctcatccaggctgctcagctgctacaggtgaagaagaagacatct
caggacgctgaggccatctgctccatgtgcaatattctgagcatgcatcagattgtgaag
atcctgaatctgtacacgccgctgaacgagtttgaggagagggtcactgtgtccttcatc
agagacatacagaatcttctacaaggccgtacagagaacaaccagctcctggtggacacc
aagcacacgttccctgtgctcttcccttacactccttcagctttgagcctggaaacgatg
cacatccctgcctctctcaacctggacttcctcgtcagagtctga
DBGET
integrated database retrieval system
