Ictalurus furcatus (blue catfish): 128622454
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Entry
128622454 CDS
T09387
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128622454 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128622454 (nfrkb)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
128622454 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
128622454
NCBI-ProteinID:
XP_053504955
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All DBs
Position
18:15801709..15823784
Genome browser
AA seq
1285 aa
AA seq
DB search
MESLDHMLTDPLVSGMDYDGCVMEECMLGNCRVRIPEDVLEDPEIFFSVMSESTWSEVLT
DAQKQHLRQFLPHFPENNSSAQDRVISDLFNGQNFCFGNPLHLAQKLFRDGYFNPEVVKY
RQLCTKSQKKRQIYSLQQYYHKLLKQILISRKELLDMAVRSGPELAVKRRYPPPSHREER
EQRVRRRVSRILRDVKTECGDSNVSSDEDDTASWLSTPPSPSSPTPTVSLRVLPSLSTQD
MKTIDKPELGEKDLRDMLRRHREKRKRQPDHPDLMTSDLHLGDIMSRVNIGRKGSNMALI
DLALSKKKIREEKRRKKMRPIKTESDDGCEGQTPAASLSATITDSTPALLQSVKEEAMEE
SQNSPDTVEEIAISFFHLLEDILRQENLASSSLIEEKVQQWQVSAASTLNPWFSMAPCWS
ELIVPALQFLAGESKSGCMALPSGFMPYVEFRELTQQWKWIGPTQDSEKDLNALCMLWLE
SKDHVVVKQEGEETAELTPPAPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTFRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFE
RIHQAQAAAAKARKALQQKPKPTPKPKSGNKDAAVKSSAAEGQSSAPEGVSIPAVSLPQP
PSTPTPSTPGTPKSPLPPTVSTPTKAGVPDPVKTSPSVLLVSPPSMPQLGTLLSATQVTP
QASQQASVQPAARVVAHSASQVHVVTAQPSHSAASAGQAATLIHHQTPHHIRLPVSVAHS
KGIAQAVVTLPLRSQSTGSPIQVQASRAQTGISVPGLASAVAVSKAQSSSPGSPAPNIPS
PALLQGVTSQNIIKQVAITSQLGMKAQNPTGIPLTATNLRIQGKDVLRLPPSSITTDAKG
QTVLRITPDMMATLKLTPDMLTSAGSTTAKGISATLHVTPQQAPPTVSSNTVPPATAETL
TAKASSSLPAPGTATLVKATCDTAIRLMPALAVTMADPKARAFSTVTPSDSKAGGTTIRI
VPSLGVIPQKQGQTVPVTTTTSAKPGTASSGAATVTIATSGVAGAKGVTLGTSAVGSPLS
LGTATATVRQVQGTATVVATQPGKLPARITVPLSVLSQPLKSKSVVTTPILKGNISTNIS
NLGRNIILTSMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQHSAS
SSPKSTVSTVVVSTAPSAKTNPDPQ
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttagatcatatgctaacagaccccttagtctcagggatggattatgatggc
tgtgtgatggaggagtgcatgttgggaaactgcagagttcggataccagaagatgttcta
gaagatccagagattttcttctctgtgatgagtgaaagcacctggtctgaggttctgact
gatgcccagaaacaacatctccgccagttcctaccacactttccagaaaataacagttca
gcgcaggacagagtcattagtgacctcttcaatggccagaacttctgctttggaaaccct
ctgcaccttgcccagaaactatttagagatggctactttaacccagaagtggtcaagtac
aggcagctctgcacaaagtcccagaaaaagcgtcaaatctactctctccagcagtactac
cacaaactgctcaaacaaatcctcatctccagaaaggagttgttagatatggctgttcgc
agtgggcccgagctggcagtgaaacggcgttatcctcctccttcacacagagaggagcga
gagcagcgtgtgaggcgcagagtgagccgtatactgagggacgtgaagactgagtgtggg
gacagcaacgtgtcctctgatgaagacgacactgcttcttggctgtcaacacctccatcc
ccatcttctccaacaccaacagtctctctcagggttctgcccagtctctccacccaggac
atgaaaactatagataagccagagctgggagagaaggacttgagagatatgctgagaagg
cacagagagaagaggaaacgacaaccagatcatcctgacttgatgacatcagatttgcac
ctgggtgacatcatgtcacgagtaaatataggcagaaaaggatccaatatggccttaatt
gatttggccttgtctaagaaaaagattagagaagagaaaaggagaaagaagatgagaccc
attaaaaccgaatccgacgacggctgtgagggtcagacaccggcggcctcattgtccgcc
accattaccgacagcacacctgctctcctgcagagtgttaaggaagaagctatggaggag
tcccagaacagccctgacacggtggaggaaatagccattagcttctttcatctgctggaa
gacatccttagacaggaaaatctggcgtcctcttcactgattgaggagaaggtacagcag
tggcaggtctctgctgctagcacactcaacccttggttctccatggccccctgttggtca
gagctaatagtacccgctctacagttcttagctggagagagtaagtctggttgtatggct
ctacctagtggcttcatgccatatgtggaattcagagagctaacccagcagtggaaatgg
attggacccactcaggacagtgaaaaggatctcaatgctctttgcatgctttggctggag
tcaaaggaccatgttgtagtcaagcaagaaggggaagaaacagcagaactgactcctcca
gctcccagagtatggactgattacgtggtgaggcccagcacaggagaggagcggcacgtc
tttcaagagcaggagcagcaacgctatgaccagcctcacaaagccttcacctttcgcatg
cacggctttgagtctgtggtggggccagtcaagggagtttttgataaggagacttccctc
aacaaagcccgtgagcactcactgctgcgctctgaccgtccagcctacgtcaccatcctg
tcactggtacgggacgcagctgccagactgcccaatggtgaaggcacccgagctgagatc
tgcgagctgctaaaagactcccagttcttggctcctgatgtcaccagtgcgcaggtgaat
acagttgttagcggtgctctcgaccgcctgcactatgagaaggacccatgcgtgaaatac
gacattggccgtaagctgtggatctacctgcaccgagaccggagtcaggaggagtttgag
aggatccaccaggctcaagcggctgcggccaaggcacgaaaagctctgcagcagaaaccc
aaaccaaccccaaagcctaagtctggaaacaaggacgcagctgtgaagagcagtgctgca
gagggccagagctcagcacctgaaggagtttctatacccgctgtcagcttacctcaaccc
cccagcacaccaacaccaagcactccaggcacaccaaaatctccactaccccctactgtg
tctacaccaaccaaagcaggagtgccagatccagtcaaaaccagtcctagcgtcctcctg
gtgtctcctccctccatgccacagctgggcactttgctgtctgccactcaggtcactcct
caggcctcccagcaggcctcggtgcagcctgcagctcgagtggtagctcattcggcttcg
caggtgcatgtagttactgctcagcccagccattctgctgcttctgcgggtcaggcagcc
acactgatccaccaccagaccccccaccatatcagactgcctgtcagtgtggcccacagt
aagggcattgcccaggctgtggtgactctgcctttgaggagccagtccacaggaagtcct
atccaggtgcaggcatcaagagctcaaactggcatctctgtgccaggtctggcttctgct
gttgctgtcagtaaagctcagagcagttctccaggaagccctgctcccaacatcccatct
cctgcattgctgcaaggggtcaccagccagaacatcatcaagcaggttgccattactagc
caactgggtatgaaagcccagaacccaacaggcatccctctgacggccaccaacctccgt
attcagggtaaagatgtgctgcgcctgccaccctcttcaatcaccaccgacgctaaagga
cagacagtgctgcgcatcaccccagacatgatggctactctcaaactcacccctgacatg
ctgaccagcgccggcagcaccactgctaagggcatttctgccaccttgcacgtgaccccg
cagcaagcccctcccactgtttcatctaacactgtccccccagccaccgccgagaccctg
actgccaaagcttcctcttccctgccagcaccaggcaccgctaccctggtgaaagccacg
tgtgacactgctatccgcctcatgcccgccctggccgtcactatggcagaccccaaagcc
cgtgccttctccactgtcaccccctcggactcaaaagctggtgggaccaccattcgcatt
gtgcccagcctgggcgtgataccacagaaacagggtcagacagttccagtcactaccact
acaagcgcaaagcctggcactgcttcttcaggggcagccacggttaccatagcaaccagt
ggagtggcaggggctaaaggggtgacactgggcacttctgctgtgggttcgccgctgtct
ctgggcactgctacagccacagtgagacaagtgcagggcactgctacagtggtggccaca
cagccagggaagttacctgcaaggatcacggtgcctttgtctgttcttagtcagcctctg
aagagcaaaagtgtggtcactacaccaatactgaaaggaaacatcagtactaatatcagt
aatcttggcaggaatattatcctgaccagcatgccggcaggcaccaagctaatcgccggg
aataagcctgtcagcttcgttacagctcagcagctgcagcagctgcaacaacagggccag
gccacacaggtgcgtatccagactgtcccagcacagcaactgcagcagcactcagcatcc
agctcccctaaatctacagtgtccactgtggtggtgtccactgccccctcagccaaaaca
aaccctgacccacagtga
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