Ictalurus furcatus (blue catfish): 128622531
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Entry
128622531 CDS
T09387
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128622531 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128622531 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128622531 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128622531 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128622531 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128622531 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128622531 (thbs4b)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Opsonins
128622531 (thbs4b)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128622531 (thbs4b)
Exosomal proteins of colorectal cancer cells
128622531 (thbs4b)
Exosomal proteins of bladder cancer cells
128622531 (thbs4b)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128622531 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
DUF7630
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
128622531
NCBI-ProteinID:
XP_053505094
LinkDB
All DBs
Position
18:1288561..1304606
Genome browser
AA seq
951 aa
AA seq
DB search
MTGRMQLLIAISLILSLNSAVDAESTVYNLLTSPDCLPDLLHGGLAEQGVTELFLFATFR
LQPRTGTTVFGLYNPQDNSKYFEFTVMGKLNKATLRYLRIDGRIATVTFNNLKLADGEKH
HLLFHLKGLEVPYNQGSFPPGQATLPVPSLELHLDCRLVETLRDLPAVFNGLNNNKGVEL
KTMQRKAHEELEELKLAYGDSVENVASLQGCHPHQSDSVQTLGLNTKQLTNQMLELTKVI
NELKDVLVQQVKETAFLRNTISECQACDLGGTTVKQQCAPGVCFRSDMCIETEEGVECGP
CPDGYTGDGYRCDDVDECQFNPCFPGVKCVNTAPGFRCEACPNGYTGQPVEGVGVAFAQT
HKQVCDDIDECSRPNNGGCTANSVCLNSMGSYRCGGCKTGFTGDQVRGCKPEKSCGNRLQ
NPCDPNAQCIEERDGTITCQCGIGWAGNGYLCGKDTDIDGYPDEKLRCRDPTCKKDNCVM
VPNSGQEDADSDGQGDACDPDADGDGILNEQDNCWLKPNVNQINSDKDSHGDACDNCLTI
ENPDQRDTDSDGLGDACDDDMDGDGIKNFLDNCQRVINRDQRDRDRDGVGDACDSCPDIP
NPNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPLVINSSQLDTDKDGLGDECDDDDDN
DGIPDFLPPGPDNCRLVPNPDQTDDNNDNVGDICESDFDQDKVIDRIDNCPENAEITLTD
FRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKSGPGEHL
RNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTELVADSG
VTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQPVLYPL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacagggaggatgcagctccttatagccatatctctaattctcagtttgaattcagcc
gtggatgctgagtcaaccgtgtataacctgctgacatcaccagactgtctgccggatctc
ctgcatggaggtttagcggaacagggagtaacggagctcttccttttcgcaacattccgc
ctgcaaccccgaactggaaccacagttttcgggctttataacccacaagacaacagcaaa
tactttgagttcaccgttatgggcaaactgaacaaagcgacactgcgttacctacgcatt
gatggcaggatagctaccgtcacctttaacaacctcaaactggcggacggagagaagcac
cacctcctttttcacctgaagggcctggaggttccatacaaccaggggtcttttccacct
ggccaggcaacattgccggtgccgagcttggagttgcacctggactgccgattggtggag
acattgagggatttaccagcggtgttcaatgggcttaataacaacaagggtgtggagcta
aaaaccatgcagagaaaagcacacgaggagctggaagagctgaaactggcttatggtgat
tcggtagagaatgttgcatcgctgcagggttgccacccccaccagagtgactctgtacag
acactagggctcaatactaaacagctgaccaatcagatgctggagctcaccaaagtcata
aatgagctgaaggacgtacttgttcaacaggtgaaagagactgccttccttagaaacaca
atctctgagtgtcaagcatgtgatctgggtggtacaacggtgaagcagcagtgtgctcct
ggggtatgtttccgttctgacatgtgtatcgagacggaggaaggggtggagtgtggcccc
tgtcctgatggatacaccggagatggctatagatgtgacgacgttgatgagtgccagttt
aacccctgtttcccgggtgtgaaatgtgtaaacacggctcccgggttccgctgtgaggcg
tgtcctaacggatacaccggtcaaccagtggaaggtgtgggagtggcttttgcacagaca
cacaaacaggtgtgtgatgacattgatgagtgcagcaggccgaataatggaggctgtacg
gccaattcagtctgcctgaactcgatgggctcatatcgctgtggtggctgtaaaacagga
ttcaccggtgaccaagtgagaggctgtaagccagagaaaagttgtgggaatcggctgcag
aacccctgtgatccgaacgcgcagtgcattgaggaacgagatggcacgatcacttgccag
tgtggtattggctgggcaggaaatggctatctatgtggaaaggacactgacattgacgga
tacccagacgagaagcttcgctgccgagatcctacctgcaaaaaggacaattgtgttatg
gtgccaaattcaggacaggaagatgccgattcagatggacaaggtgatgcgtgcgaccca
gatgctgatggagatggaatactgaacgagcaggacaattgctggctgaagccgaatgtg
aatcagataaacagtgataaggatagccatggtgatgcatgtgataactgccttaccatt
gagaatccagaccagcgagacactgattcagatggccttggggatgcatgtgatgatgac
atggatggagacggtattaaaaacttcctggacaactgtcaacgagtgataaatcgggac
cagcgggaccgagaccgagacggagtgggagacgcttgtgacagctgccctgatattccc
aaccccaaccagtcggacattgataatgatcttgtcggagactcttgtgacacaaatcaa
gacagtgatggtgacggacatcaggattcaaaggacaactgtccattggtgataaacagc
tcccagttggacactgataaagatggactgggtgacgagtgcgatgatgatgatgataat
gatggcatccctgacttccttcccccaggccctgataattgccgcctggtgcccaaccct
gaccaaacagacgacaacaatgacaatgtaggtgacatatgtgagtcagattttgaccaa
gacaaggtgatcgacaggattgacaactgtcctgagaatgcggagatcacactgacagac
ttcagggcatatcagactgttgtgctcgaccctgagggtgatgcccagatcgaccccaac
tgggtggttctcaaccaggggatggagattgtgcaaacaatgaacagtgaccctggcctt
gctgtgggttacacagcgttcagtggtgttgactttgagggcacgttccacgtgaacacc
gtgactgacgacgactatgctggcttcatattcggctatcaggactcatctagcttctac
gtggtgatgtggaagcaaacggagcagacgtactggcaggctacacccttcagagctgtt
gctgagcctggcattcaactgaaggcagtgaagtctaagtctggtcctggtgaacatttg
agaaactccctctggcatacaggtgacactaacgatcaggtgcgcttgctctggaaagat
ccacgtaatgtcggctggaaggacaaagtgtcataccgctggtacctacagcaccgtcca
caagtggggtacatcagggtacgtttctatgaaggcacggaattggtagcagactctggt
gtgacaatcgacacaacaatgaggggaggcaggctgggcgtgttctgcttctctcaggag
aacatcatatggtccaacttgaagtaccgctgcaatgacactattccagaagacttccag
gagtttagcacacagccagtcttgtatcctctgtaa
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