Ictalurus furcatus (blue catfish): 128622572
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Entry
128622572 CDS
T09387
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
ifu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128622572 (gabra6b)
04082 Neuroactive ligand signaling
128622572 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128622572 (gabra6b)
Ion channels [BR:
ifu04040
]
Ligand-gated channels
GABA-A
128622572 (gabra6b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cyclin_N
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
128622572
NCBI-ProteinID:
XP_053505166
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Position
18:8961584..8988501
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AA seq
499 aa
AA seq
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MSCTHHQLTRRRHTHTHTHTHTHTRSGPAMALIHTLILLSCAGKVWSKSGPSGSRVYLNN
ITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDER
LRFEGPIKILRLNNLMVSNIWTPDTFFRNGKRSIAHNMTTPNKLFRIMQNGTILYTMRLT
INAECPMRLINFPMDGHSCPLKFGSYAYPMSEILYTWKKGPLFSVEVPPESSSLLQYDLI
GQTVSSEKLKSSTGEYIVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPA
RTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTVQ
ANREHRRANAVQAAQAAMATAAKSDSIDVTSLVDSSSVLKKRLNSVPQKESSMVPASPVH
ELRQQGSATPDNAMLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDPMETRCVYMYVC
MCMSVCVCVCECACVMCDV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtacacaccatcagctgacacgaaggaggcacacacacacacacacacacaca
cacacacacacacgctcaggaccagccatggctctcatacacactctcattctgctctca
tgcgcggggaaagtttggtccaaatccggcccgagtgggtctcgagtctatctgaacaat
atcacacggattctggacagactgctggatggatacgacaacagactgagaccaggtttt
ggaggtcccgtcacagaagtcaaaacggacatcttcgtcaccagcttcggtcccgtgtct
gacgtggaaatggagtacaccatggacgtgtttttccgccagacgtggatagacgagcgt
ctgaggttcgagggtcccatcaagatcctgcgtcttaacaacctgatggtaagcaatatc
tggactccggatacatttttccgaaacggcaaacgctccatcgctcacaacatgacgact
ccgaacaagctgttccgtatcatgcagaatggaaccatcctctacaccatgagattaacc
atcaatgccgagtgtccgatgagactcatcaacttccccatggatggacattcctgtcct
ctgaagttcggcagctacgcttacccgatgagtgagatattgtacacttggaagaaaggg
cccttattttctgtggaggtgccaccggagtcgtccagcctgctgcagtacgacctgatc
ggacagacggtgtcgagcgaaaagctcaagtccagcacgggtgaatacatcgtcatgacc
gttcactttcatttgcagaggaagatgggtttcttcctgattcagacctacatcccctgc
atcatgaccgtcatcctcgctcaggtttccttctggatcaacaaagagtccgttcctgcc
aggaccgtcttcggcatcactacagtgctaacgatgacgactctgagtattagcgctcga
cactcgctgcctaaagtctcctacgccaccgctatggactggttcattgccgtgtgcttc
gccttcgtcttctctgccctcatcgaatttgccgccgtgaactacttctccaccgtgcag
gccaaccgagaacaccgccgtgccaacgctgtccaagctgcccaagctgccatggcaacc
gccgccaagagcgacagcatagatgttacgtcgctggtggactccagcagtgttctgaag
aaaaggctgaactcagtgccgcagaaggagagctccatggttcctgcaagcccagtgcat
gagttacgtcagcagggttcagccacgcccgataacgccatgctaactggcaccagcatc
attgataaatactcacgcatcctcttccctctgtccttcggcgcctttaaccttgtttac
tggatcgtttacctcaccaaggaccccatggagacaaggtgtgtgtatatgtatgtgtgt
atgtgtatgagtgtgtgtgtgtgtgtgtgtgagtgtgcgtgtgtgatgtgtgatgtgtag
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