Ictalurus furcatus (blue catfish): 128622574
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Entry
128622574 CDS
T09387
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
ifu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128622574 (gabra1)
04082 Neuroactive ligand signaling
128622574 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128622574 (gabra1)
Ion channels [BR:
ifu04040
]
Ligand-gated channels
GABA-A
128622574 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
128622574
NCBI-ProteinID:
XP_053505168
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Position
18:9025242..9052709
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AA seq
483 aa
AA seq
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MMWARLGAAWIWAWLLVVNVLGKSRIQMDKSLPLFTYLDLCYSPCLVSKHCSNQNGSDEQ
KDNTTVFTRILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQ
SWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLL
YTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRL
NQYDLMGQTVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLN
RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN
YFTKRGYAWDGKSVVPEKQKKKKESLLKKNNTYTAATATAFAPNIARDPGLATIAKSAPP
PPTEPKEEPKPKPAEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKIQDAL
TPH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgggctcgactgggagcggcgtggatctgggcctggttactggtggtcaacgtt
ctgggcaaaagtcgcatccagatggacaaatctctgcctctgtttacgtatttagacctc
tgctactcgccgtgtttagtctccaagcactgctcaaatcagaacggatcggacgagcag
aaggacaacaccaccgtcttcacccgcatcctggacagtctgctggacggctacgataac
cgtctcaggccgggacttggtgagcgcgtgactgaggtgaagaccgacatcttcgtgacg
agtatcggccccgtctccgatcacgacatggaatacaccatagacgtgttcttcagacag
agctggaaggacgagcgtttgaagtttaaaggtccaatggccgtgttgcgcctcaacaac
ctgatggccagtaagatctggacccccgacacgttcttccacaatggcaagaaatctgta
gcgcacaacatgaccatgcccaataaactgctgcgcatcacggaggagggaacgctgctc
tacaccatgaggttgacggtgagagctgagtgcccgatgcacttggaggatttccccatg
gatgctcacgcctgtccactcaaatttggcagctatgcgtacacgcgggcagaggtggtg
tatgtgtggacgagaggagcggctcagtcagtggtggtggctgaagacggatctcggctg
aaccaatacgacctgatgggacagacggtggactcaggagtcgtccagtccagcaccggc
gagtacgttgtcatgacgacacacttccacctgaaaaggaagatcggctactttgtcatt
cagacgtatctgccatgcatcatgaccgtcatcctatcacaggtttccttctggctcaac
agagaatcggttcctgctagaactgtgtttggagtgaccactgttctgaccatgaccact
ctgagtatcagtgctagaaactctctgcccaaagtggcctacgccaccgctatggattgg
ttcatcgccgtctgctatgccttcgtgttctccgccctcatcgaattcgccactgtcaac
tatttcacaaagaggggctatgcctgggacgggaagagcgttgtacctgaaaagcaaaag
aagaaaaaggagtctctcctgaagaagaacaatacctacacagctgccacggcaaccgct
ttcgcccccaacatcgccagagatccaggattagcaaccatcgccaaaagcgcacctcct
ccaccaaccgagccaaaagaagagccgaaacccaaaccggctgaggcaaagaaaacgttc
aacagtgtgagcaaaattgaccggatcgccagaatagcgtttcctctactctttggtacc
tttaacctggtctactgggcgacttatctaaataaaaaacccaaaattcaagacgcgcta
acacctcactaa
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