Ictalurus furcatus (blue catfish): 128622600
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Entry
128622600 CDS
T09387
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128622600 (irx1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128622600 (irx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PAC1
Motif
Other DBs
NCBI-GeneID:
128622600
NCBI-ProteinID:
XP_053505247
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Position
1:1970808..1979239
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AA seq
429 aa
AA seq
DB search
MSFPQLGYPQYLYGVGAAADRQLLAPSSVSPASPPSSRGANCDVAGSACAVTSLLAAGAG
GAGGVYAHPYGYGAFLPYTSAAELALFSQMGSQYDLKDSPGVSFAAHASPAAFYPYAGFQ
YGDASRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
LKKENKVTWGARAKEDGEDGAIFGSDNEDKREDEEEIDLESIDIDKIDENDGDRSNAEEE
EDDDEDDEDEDKRARKLLKERDDAHAHANAHVNANKNMTIMTSPSLQLPVSSKPKIWSLA
ETATSPDVSKNAGVQHPAFLANHRLYTCPIGKIHSWNNSAFLSHNSLLNVRSLVGVNQNH
HHHHHHHHQTQQQQPQQQQQGVMEKDKSPEQLSPKHTERGVESPTHTITKSSFRPLHDGP
RNPHRVVTT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccgcagctgggctacccgcagtacctgtacggtgtcggagcggcggctgac
cggcagctcctcgcgccgtcgtcggtgtctcccgcgtctccgccgtcctcgcgcggggcc
aactgcgacgtggcggggagcgcgtgcgccgtcacctcgctgctcgcggcaggagccggc
ggcgccggtggcgtgtacgcgcacccgtacggctacggcgcgttcctcccgtacaccagc
gccgccgagctcgcgctcttctcccaaatgggttcacagtacgatctaaaggacagcccc
ggcgtcagttttgccgcccacgcgtcccccgccgcgttctacccctacgccgggttccag
tacggcgacgcgtcgaggcccaagaacgccacgcgtgagagcaccagcacgctgaaggcc
tggctgaacgagcaccgcaagaacccgtaccccaccaagggcgagaagatcatgctggcc
atcatcaccaagatgacgctcacgcaggtgtccacgtggttcgccaacgccaggcggaga
ctcaagaaggagaacaaagtgacgtggggcgcgcgcgccaaggaggacggcgaagacggc
gcgatcttcggcagcgacaacgaagacaagcgcgaggacgaggaggagatcgacctagag
agcatcgacatcgataagatcgacgagaacgacggggatcgcagcaacgccgaggaggag
gaggacgacgacgaggacgacgaggacgaggacaaacgagcacgcaagctcctcaaggag
cgagacgatgcacacgcgcacgcaaacgctcatgttaacgctaacaaaaacatgaccatc
atgacatcgccaagcctccagctccccgtcagcagcaaacccaagatctggtcgctagcg
gagacggccacgagtccggacgtgtccaaaaacgctggcgtccaacatccggccttcctc
gctaaccacagactgtacacctgccccatcggcaagatccacagctggaacaacagcgcc
ttcctcagccacaactcgctgctcaacgtccgctcgctggtgggagtaaatcagaaccat
catcaccatcaccatcatcatcatcaaacacaacaacaacaaccgcagcagcagcagcag
ggtgtaatggagaaggacaaaagcccagagcagctcagccccaaacacacagagcgggga
gtcgagtcgcccacacacaccatcacaaagtcctcgttcagacctcttcacgacggtccc
aggaatccgcatcgagtcgtcacgacctga
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