Ictalurus furcatus (blue catfish): 128622700
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Entry
128622700 CDS
T09387
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128622700
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128622700
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
128622700
NCBI-ProteinID:
XP_053505376
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Position
18:14825445..14846742
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AA seq
1338 aa
AA seq
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MAPVRIKHVVSFTSEDPKHRVVNLCSGGGGSGPWLCSTAERSGLLKAELQLDRTSTIAFI
DVGNHGSAFIQVDVGRSSWSIDHPYVSLLPTATLMNPADSRQGTGKNSVRMFKKGDFLPQ
AAEESWDRLRVTCSQPFNKRNQFGLSFFRVRTADEHTEEPSANQENPTTKNQRTPDKMWS
VREWISSPPVQHTFFGQKRGESSPGEPTKDHEKLSRAERMVTAAQSIRRALHNTSCNVLM
SSSNRQEKTQNTLHGPARTPQARRRKSETMREQAIMSSTPKRSRCSTSDVTAIKKKNDAF
RRSPVKSHMPATSPPKNSPVYPEPPETVCPICGVSFSPDCLPLHASSCLDSGSVDFSSVM
ETETESSFSFRPPSGPSTDELVVPCPLCSFRFPIDCIQQHASTCGDTVWVDIAFALLIST
SQPAQWREIVNKKMLFPPELISAIHEGNVAGIRSLLKTGDGIIRQLEESEDRQWREALNL
SIRLGNEDTMVTLLHGVKFDFRQIHEALLVAVDTNQPRIVKRLLDRLDQEKGNKMDVHSF
NQAIFDHSIDDSQFAPGVTPLTLACQKDRYDIVTMLTQKGHVIPWPHKVSCSCLECRNGR
QYDLLKFSLSRINTYRGLASRAYLSVTTEDAMLSAFYLSRDLRKLSKREPEFKPQYLALE
ELCQEFAVELLGMCRNQSEVTTILNDCGINDADSQEELEKHSFEEGIPNLARLRLAVNYN
QKQFVAHPICQQVLSSIWAGNLSGWRGSRTAWKLLVSVGIFVTMPILCLIYWIAPKSKVG
KILKIPAIKFILHSASYLWFLITLLAESIIMEMFRDASSTRNQTILQNSIHMVWVAGFFW
YECKEVWIEGLRSYFLDLWNCLDVIVLSMYLASFALRVVVLVKGYIVCQQPESAECFYFT
QSARQDWFQEDPQIIAELLFAVTSMLSFTRLAYILPAQESLGTLQISMGKMIDDMMRFLF
ILMIIGTAFLCGINNIYVSYAESQYLGRFNETFQFLFWTMFGVVNKEYVDMPEHDLAQFV
GRILYGIFTLLIVIVLLNMFIAMITNSYQKIEDDADVEWKFARSKLYLSYFREGLTMPVP
FNIIPSPKAFFYLIRKLCCWCNFNSAPDYPPIGSVSNETDEKVSYRNQVIRALVQRYIDS
ARREFEETKRKDIGNRVTELSKVVGHLHGEMKQIHQTLLDMGENRLDPSERSTSSIIGKY
IQGAKNNFRDFNSVVPSESKSVPLLANVHQMKSEDEADVNGEEINDTEETFDKGKIEEDG
AGDEIMEQEGKDQTGDGCKVEEDGADESNDQSLVEDETTKMEEGRANAGIEEPLTGSSGS
QDTGFGSEESEFSASSPE
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttagaattaaacatgttgtctcgttcacgtcagaggacccgaagcaccgt
gtggtgaacttgtgctctggcggtggaggaagcggcccgtggctgtgtagtacagcggag
cggagcggccttcttaaagccgagctgcagctggaccggacttctaccatcgcctttata
gacgtgggaaaccatggctctgcgtttattcaggtggacgtggggcgctcgtcatggtct
atagatcatccatatgtctcacttctgcccactgcgaccctaatgaacccggctgattca
cgacaaggcacaggaaagaacagtgtgcgtatgttcaaaaaaggtgatttcttgccccag
gctgctgaagagagctgggacaggctgagggtcacgtgcagtcagcccttcaacaagcgc
aaccagtttggcctgtccttctttcgtgtccgcactgctgatgaacacactgaagagccg
tctgccaatcaggagaaccccactaccaaaaatcagcgtacaccagataagatgtggtca
gtaagagagtggatctccagccctcctgtacaacacaccttctttggccaaaaaagagga
gaaagctctccaggagagcctacaaaggatcatgagaaactgagcagggcagagcgcatg
gtaacagctgcacagtcaatcaggcgcgctctacataacacctcctgcaatgttttaatg
agcagtagcaatagacaggagaagacccagaacacactgcatggtccagccaggactcct
caggcacgcaggagaaagtctgaaacgatgcgcgagcaagcaatcatgtcctctactcca
aagaggtccagatgtagtacatcagacgttactgccatcaagaagaaaaacgatgcattc
agacgcagccctgttaaatctcatatgccagcaacatcaccaccaaagaacagcccggtt
tatcctgaacctcctgagactgtatgcccaatatgtggagtgtctttcagcccggactgc
ttgcctcttcatgcttcttcctgtctggattctggttcagttgatttctcaagtgtcatg
gagacagaaactgagtcatctttttcctttcgtccaccttctggtccaagcacagatgag
ctcgtggtgccatgtcctctgtgctccttcaggttccctatagactgtatccaacagcat
gccagtacctgtggtgacactgtgtgggtggacattgcttttgcattgttgatttctacc
tcccagccagcgcaatggcgcgagattgtgaacaaaaagatgctcttccccccggagctc
atcagcgccattcacgaggggaacgtggctggaatccgtagcctgctgaagaccggcgat
ggcatcatccgccagctggaagagtccgaagacaggcagtggagagaagcactgaacctg
tccatccgccttggcaatgaggacaccatggttactctgctacatggagtcaagtttgat
ttccgacaaatccacgaggctcttttggtggctgttgacactaaccagccacgtattgtg
aagcgcctcctcgaccggctcgatcaagagaaaggcaacaagatggatgtgcactctttc
aatcaggccatttttgaccattccattgatgattctcagtttgcccccggggtgacgccg
ttgacgctggcctgccagaaggaccggtatgacattgtgaccatgctcacacagaagggc
catgtcatcccatggcctcacaaggtctcctgtagttgtctcgagtgccggaacgggcgc
cagtatgacttgctcaagttctcactgtcacgcattaacacttaccgtggccttgccagc
cgggcatacttgtccgtcactaccgaggatgccatgttgagtgctttttatctaagccgg
gaccttcgcaaactctctaaaagggagccggagtttaagccacagtaccttgcactcgag
gagctgtgtcaggagtttgctgtggaattactgggaatgtgccggaaccagagtgaggtc
accaccattctcaacgactgtgggattaacgatgccgacagtcaagaagagctggaaaaa
cactcattcgaagagggcataccaaacctggcccgattgcgactcgccgtgaactacaac
cagaaacagttcgtagcccacccaatctgccagcaggttctttcatccatctgggctgga
aacttatctggctggagaggcagcaggacggcctggaaactcctggtctcagtggggatt
tttgtcaccatgcctattctctgcctcatttactggattgcaccaaagtcaaaggtggga
aagattttgaaaattccagcaatcaaattcatccttcactctgcctcctacttgtggttc
ctcatcacactgttagcggaatccataatcatggagatgtttcgtgacgcatcttcaacc
aggaaccagaccatattgcagaactctatccacatggtgtgggtggctgggtttttctgg
tatgagtgtaaggaggtctggatcgagggcctgaggagctacttcctggacttgtggaat
tgtctggatgtaatagtgctcagcatgtatctggcctcttttgcactgcgggtggtcgtt
ctggttaaaggctatattgtgtgccagcaacctgaaagtgcagagtgtttctactttacc
cagtctgcacgtcaagactggtttcaggaggaccctcagataatagctgaattgctcttt
gctgtcaccagcatgctgagtttcacacgtttggcctacatcctgcctgcgcaagagtct
ctgggaaccctgcagatctctatggggaagatgattgatgatatgatgaggttcttgttt
atactgatgatcattggtacagcctttttgtgtggtatcaacaatatctatgtttcttac
gccgaatctcaataccttggaaggtttaatgagaccttccagttcctgttctggacaatg
tttggtgttgtcaataaggaatatgtggacatgcctgagcatgatttggctcagtttgtg
ggcagaatcctgtatgggatcttcacactactgatcgtcattgtgctacttaacatgttt
attgctatgatcacaaactcttaccagaagattgaggatgatgcggatgtggagtggaaa
tttgctcgctccaaactgtatctgagctacttcagggagggactcacgatgcctgtcccc
ttcaacatcattccctcaccaaaagctttcttctacctcataagaaaactctgctgctgg
tgcaactttaattcggctccggactatccacctatcggctctgtgtctaatgagacagat
gagaaggtgtcgtacagaaatcaggtgatccgggctttagtgcagcgttatattgattct
gccagaagagagtttgaggagacgaagcgcaaagatattggaaaccgggtcacagagctg
agtaaagtggttggacacctgcacggtgagatgaagcaaattcaccagacactgttagac
atgggggagaaccgactggatccttcagaacgtagcacttcctccatcatagggaagtac
atccagggcgccaaaaacaacttccgtgactttaacagcgtcgtaccttcagaaagcaaa
agtgtccctttgctggccaacgtccaccagatgaaatctgaagatgaagccgatgtgaac
ggagaggagataaacgacacagaagagacttttgataaaggtaagatagaggaggacgga
gcaggtgatgagatcatggaacaggagggtaaagatcagactggggatggatgtaaggta
gaggaagatggagccgatgaaagcaatgatcagagtctagttgaagatgaaacgacgaag
atggaggaggggagagccaatgcaggaatagaagaaccactaaccggcagcagtggctct
caggacaccgggtttggttctgaagaatcagaattctccgctagcagtcctgagtaa
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