Ictalurus furcatus (blue catfish): 128622748
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Entry
128622748 CDS
T09387
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03420
Nucleotide excision repair
ifu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128622748 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
128622748 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ifu03051
]
128622748 (rad23b)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128622748 (rad23b)
Proteasome [BR:
ifu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
128622748 (rad23b)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128622748 (rad23b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
CUE
RAP1
Ubiquitin_5
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
128622748
NCBI-ProteinID:
XP_053505436
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Position
18:complement(18880495..18891541)
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AA seq
384 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKESFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPAAAQSSTTAASSSSSTSSTTTPTVPPVAASAATTTTTTT
TTTDSTSESSVIEEKAAEEKPPSSTPASSGSLTNVNIFEEATSALVTGQSYENMVTEIML
MGYEREQVVAALRASFNNPDRAVEYLLTGIPVESEGNVGASDPAAPVGGAPAVTTGLSSP
SSTTPTQPTAGSGANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISS
HQEQFIQMLNEPAQEAGQGGGGGVSEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQ
AYFACEKNENLAANFLLQQNFDDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacactgaaaaccctgcagcagcagacgtttaagatcgacatcgacgcggag
gagacggtaaaggcgttaaaggagaaaattgagaatgagaaagggaaggagagttttcct
gtcgctggacagaagttgatctatgcaggtaaaatcctaaacgatgacaccgcactgaag
gagtataagatagatgagaagaactttgtggttgtcatggtagcaaagcctaaagctgct
cctgcagccgctcaatcttcaactactgcagcatcatcaagtagttccacctctagcact
acaacacccacagtcccccctgttgctgcctctgccgccaccaccaccaccaccaccacc
accaccactgactccacatccgaaagcagcgtcatagaggagaaagcagcagaggaaaaa
ccgccatcttctacacctgccagttctggtagcctgacgaacgtcaacatattcgaggag
gcgacttctgctctggtgacaggacagtcgtatgagaacatggtgactgagatcatgtta
atgggctatgagagagaacaagtggtggcagcgctgcgtgccagtttcaacaacccagac
cgagctgttgagtacctgctcacgggaattccagtggagagtgaggggaacgtgggggcc
tctgatcctgcagctccagtagggggagcaccggctgttaccacaggactctcatcacca
tccagcacaacacctacacaacccactgctggatcaggagctaatcctctggagtttctg
aggaatcagcctcagttcctgcagatgaggcagatcatccaacagaacccctcactgctg
cctgctctactgcaacagatcggccgagagaacccccagctactgcagcaaatcagcagt
caccaggagcagtttattcagatgctgaatgaaccggcacaggaagcagggcaaggaggg
ggagggggtgtgtctgaggctggtggtgggcacatgaactacatacaggtcacaccccag
gaaaaggaagcaattgagaggctaaaggcacttggattcccagaaggacttgttattcaa
gcctacttcgcttgtgagaagaacgagaatctggctgccaatttccttttacaacagaac
ttcgatgatgactaa
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