Ictalurus furcatus (blue catfish): 128623360
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Entry
128623360 CDS
T09387
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128623360 (utp20)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128623360 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Zip
Motif
Other DBs
NCBI-GeneID:
128623360
NCBI-ProteinID:
XP_053506350
LinkDB
All DBs
Position
19:14434343..14466391
Genome browser
AA seq
2832 aa
AA seq
DB search
MKLKAKPLSHKSENTYRFLTFSERLANVNIDVIHRIDRTGSYAEEVDTYFFEGLMKWRDL
NLTDHFTAFSREVSHKSQSFHMLVFHQNAIVESLKTHLSVKNSLAYQPLLDLVVQFARDL
QTDFYPHFPDFFVIITSLLETQDTEVLEWAFTCLSYLYKYLWRLMVKDMNKIYSLYSKLL
AHKKEHIRNFAAESFSFLMRKVPDFDALFTLMFMDLEQCPQKADGVGQLIFEMCRGVCNM
FHSCTNTALPVALRKLGSSGEGDVALPWDAIKEALDHMAESSANYVTKENFLVLWDSLQA
CLKDLLRKLEAEHSNQTSEHIERILFIYHTLVEHRKGAKITKPQSVCELLLQLVHTQGLS
CSCCGLLLQVISSFLLAENLSLPTSMIQELVKKVFTSGMDRDLILSFAKEMFSMKQFEQL
FLPSMLQFMEQLFSSEDSVSRLLALELLVRLILVKAQPPTDGSMAFEKYPLIFTGQSGGL
YGMDKAQAASVPQFILSLIVVPEDQLLSDLSQIWAALVLLPHLRPLEAASVIPPLTALLN
RLLHEVHSEKLGRGGLFVARQALTTLLSFKETTLVSSLLPDELVRCIIEKFPTDLSALLL
ADLYYTRLSLNGCSAQLSHDSLLDLYQMLHSNFSSNISKIRFLTLRIMSHFEAELPKTAE
GEDSSSTQTVFASCLQAEQVPATVQDYREKLLHLRKLRHDLVQPCLPRGPFHLVPVRYLI
AMLFVNFRPLWDAVIELLASHARDMDNKEFWKVFYEHLEIVAGLAEKELQQEEEEDDEGG
DQDEGAGLMLGPGTDVINSGDVGVLFLEQLEQADSVSDHTDFTNFRSLLWRAMIQFPDRV
EPRSRELSPLLLRFIRNEFYSADLLAAPVQNLTKRSLSSSQVPYETEKEDVRMREVEEED
VEEAEEESHRVEKKMPRRAAAKQLIEHLKIFSKFTNPKALYMEPELLALYTKLLCHKDQQ
IQKAALDCLMTYKDPSILPYKENLERLLDDKHFKDEIVLFNISEEGTVVLDIHRPQLIPV
LMRILYGRMRTKAGNKFQGKAATASRSSIVLRFLAGCQPQELAMFIDLLLEPVCHHSQGT
CLAAVERAMAETDPSSVLPLGRQHGLLNIIDVVLHKLGHLIQTYLPKLLQILLCVTASVA
LLLERREQLKPGCIGPLKNLRRLGLLRIQDFFDNFESYTFTADELDAVFHAIVWPQVCRL
PTESTYAPTPLLKLIHVWSMNARYFPLLAKQRPDHPECDVLLNVFALLSSKNISAITTSM
VMDICENLLNMADFTPSETETELSINECVLPKPAPGSDVTTESLTVGSRLLLPHIPAVLQ
YLGGVVRNSDRIKKKKFRAQVSKELNILSKISKFVIDKEQSSTLIHLLLPYLHKPKIAEE
TELDILSTVQNLLRQCSEPSVFLKPLSKLFSIVHSKPSRKVLCEVFKTLSDLDNELKYIV
DVAVQLNAFDSRHLDEIHFDVRLMAFQKSIKHIKEMYTLDMRYLMVIMHNCFHSFEIGDM
SLADSANLCLSAILTQLAAVGCPEQEYKEIVQYTVLDAVRRGLKSKRENVRNDYTSVLAC
LVKTFPNRSEFRDLVQLTNYTDPESDFFEHMKHIQVHRRGRALRKFAKQLTEGTVVMTSR
SMQNFIMPYAMIALFDEKLLKYEAMTSAAVDVIGAVCKRLTWSKYLYYLKHFIHVLQTGI
VEQKLAVSLLLIILEAFHFDYESLSKEIEAAKNKKADVPNVLEGEAGEEQVEAMDSDESD
MEDAMETNDADAVATETVGMDTGEGGDAKPKEGTEAKPRKVLPVVSSGLPQSKEELEALI
SSIHRTVTQSILPRLHKCLIAKVKRDDEHKTVKSKEVKDEEVVRVPIAFAMVRLMQTLPQ
EVMEANLPGILLKVCVHLKSRFQEIRDVARTTLIKIIEALGHHYLHYLLREMQGVLVKGY
QIHVLTYTVYHLLSILRPSLKPGELDSCLDILIEIFNNELFGSLAEEKGIKGIVSKVMEA
RHSKSSDSYEFLARFCSQERVTQLILPLKDILEKTASLKVSRRVHSVLRRVVAGLLLNQS
MTPQSILLLSHGLVSQSLPLITSKSKPKTAAPPDPRLPPRSCLILPPTPKRGGAKVALSR
KTNMHILVDTGLSLLHGSLKNSKVNSSVATVREMLDPFVSLLLDCLNSMHVKVITESLQA
FMWILKFPLPAVEQNAHQLTKQLFVLLKDYAKAGAGHGENFHLVQNCFKVITVIVKSVTK
NCISDTQLQVLLGYAEEDIYDNSRQATAFGLLKAILSKKLVVPEMEEVMKKVAKLSINGS
NEQVRVRCRQIYLKYLMDYPLGKKLRNHFDFIVAQLTYEYDTGRQSALEMMAFIFQAFPQ
PLLLEHCGLFFVPLSLAMVNDDSARCKKMASLSIKSLLGQLDVKHQNSMFTLVNGWLTGE
KVALRRLGTQVCGIFVEAEGEQFGRRLDSLLPLIEREIHTANFEDFEEEENEKAADRLLF
YYLTLITKLIKDCGFLELHKPADTLSSIWGHIEAHLRYPHSWVWLTASQIFGLLFAAQKP
EELLSLWHSERNAPQNIQPVASSFLSTNLDKRMRELVLSFCHQLQSKFLDISAGEQVIKN
LLFVAKVIYLISPESDLEGNEKEEGVKEVVEKKEDGDEEQDEDEEEEQDEDEEEEQDEEE
EQDEDEEEEQKQQKIIEEQDEKPPSLLWVIKKLTLLAKREAAHNPKVPMKRTCVFKFLGA
IAVDLGKERLGPYLTTIIAPLYRELDSTYADQDPTLKNLAQELIELLKKMVGLQKFSLAF
VAVQKEATQRRASRKKHKALQAVVNPDIAARKKIKKHQKKTEAKKRKIAFLRPAHKAKKS
KRTSLRDLAMVQ
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaggccaagcctttgtctcacaaatcagaaaacacttaccggtttctcaca
ttttctgagagacttgcaaatgtgaatatagatgtgatccatcggattgatcggactgga
agttacgctgaggaggtagacacatacttttttgaagggttaatgaaatggagggacctg
aacctgacagatcacttcacggccttttcaagggaggtttcccataagagtcagtccttc
cacatgttggtgttccaccaaaatgccatagtggagagtctgaagactcatctgtcagtg
aagaacagcctcgcttaccaaccacttctggatctcgtggtccagtttgcacgcgacctc
cagacagacttttaccctcactttcctgacttctttgtcatcattacttcattgcttgag
acccaggatactgaggtgctggagtgggcctttacctgcctctcctacctctataagtat
ttatggaggctgatggtgaaggatatgaacaagatatacagtctgtacagtaaacttttg
gcacacaagaaagagcacattcgtaacttcgcagctgagagtttttcctttttaatgcga
aaggttccagattttgacgccttgttcacattgatgtttatggatctggagcagtgccct
caaaaagcagatggagtcgggcagctcatatttgagatgtgcagaggagtctgcaatatg
ttccactcttgcaccaatacagctttgccagtggcactgcggaaactcggttcctctggg
gaaggagatgttgctctgccctgggatgccattaaagaggccctcgatcacatggcagag
tcttcagcaaattatgttacaaaggaaaacttcttggttctttgggattcgttgcaggct
tgcttgaaagacttgctccggaagctggaggcagagcattctaaccagaccagcgagcac
attgaaaggatcttgtttatttaccacacactggtagagcacagaaaaggagccaagatc
accaagccacagtctgtctgtgagttgcttctccagctggttcatactcaaggtctgtcc
tgctcctgctgcggtttgctgcttcaagtgatttcatcctttctgctagcagagaacctg
tccttaccaaccagcatgatccaagaactggtgaaaaaggtctttaccagtgggatggat
cgagatctgattttgtcattcgccaaggagatgttcagtatgaaacaatttgagcagcta
tttctgcccagtatgctgcagtttatggagcagctcttctccagtgaggactcagtgagc
agactgctggctctggagttgcttgtcagactgatcctggttaaagctcagcctcctact
gatggctcaatggccttcgagaagtacccgctgatcttcactgggcagtctggagggtta
tatgggatggacaaggcacaggcagcatctgtacctcagttcatcctctcccttatagtt
gtcccagaggatcagctactgtcggatctctctcagatctgggcggccctggtgcttctg
cctcacctcaggcccctggaggcagcaagtgtaattcctcctctcactgccctgttgaac
cgactgttacatgaggtgcacagtgaaaaacttggaagaggagggctttttgtggcgcga
caggctctaaccacattgctgagctttaaggaaaccacattggtgtcttctctgctcccg
gatgagctcgtccggtgcatcatagagaagtttcccactgatctttcggcactgctgctg
gctgacctgtattacaccagactgtccctcaatggctgctctgcccagctatctcacgac
tcgctattagatctatatcaaatgttgcattccaatttttcttccaacatctcaaagatt
cgctttctgacgctgagaattatgtcccactttgaagcagagcttccaaaaacagcagag
ggggaggacagctcaagcacacagacggtgtttgccagctgcctgcaggccgagcaggta
ccagccacagtgcaggattacagagagaagctgctgcacttgcgcaaactgcgccatgac
ctggtgcagccctgcctccccagagggcctttccacctggttccagtgcggtacctcatc
gcaatgctgtttgttaatttccgacctttgtgggatgctgtcattgaacttcttgcatcc
catgccagagacatggacaacaaagagttctggaaggttttctatgaacatttagagatt
gttgctggacttgcggagaaagaacttcagcaggaggaggaggaggatgatgagggtggt
gatcaggatgaaggtgcagggttgatgcttggtccagggacagatgtaatcaacagcggg
gatgttggtgttctgttcctggagcagctggagcaggcagacagcgttagtgatcacaca
gactttactaactttcgtagcttgctgtggagagccatgatccagttccctgacagagtg
gaaccacggagccgagagctcagcccactgctgctgcgcttcatcaggaatgagttctat
tcagctgacctgctagcagctccggttcagaatctcacaaagaggagcctctcttcctca
caagtcccatatgagactgaaaaggaggatgtgaggatgagagaggtggaggaagaagac
gtagaagaagcagaggaagagtcccatcgagttgagaaaaaaatgccaaggcgagctgca
gccaagcaactcattgaacatcttaagatcttctccaagttcactaatcccaaagcttta
tacatggagcctgaattactggcgctgtacacaaagctcctgtgccataaggaccagcaa
attcagaaggctgctttggactgtttgatgacttacaaagacccaagcattcttccttac
aaagagaatctggagcgactgctagacgacaagcatttcaaagatgagattgttctcttc
aacatctctgaggaaggaacagtggtgctggatattcaccggccccaacttatccctgtg
ctcatgaggatcctgtatggacggatgcgcactaaagctggtaataaattccagggcaaa
gctgccactgcatcacgttcttccattgtgctgcgcttcctggcaggttgtcagccacag
gagctggctatgttcattgacctgctcctagaacctgtttgccatcacagccaaggaaca
tgtctggctgcagtggagagggccatggctgagacagacccctcctcagtcctccctctg
ggtcgccagcatggactgctcaatattatagatgtagtgctccataaactgggccacctc
atacaaacctacctgcccaagctactgcagattctgctgtgtgtcactgcctctgtggcc
ttgctgctggaacgcagagagcagctgaagcctggctgtatcggccctctgaagaacctg
agacgactgggtcttcttcgcatccaagacttctttgacaactttgagtcttacaccttc
acagctgatgaacttgatgctgtgttccacgctattgtctggcctcaggtgtgtcgtttg
cccacagagagcacatatgctcccacgccacttcttaaacttatccatgtctggagcatg
aatgctaggtatttccctttgctggctaagcagagaccggaccacccagagtgtgatgtc
ttgctcaatgtcttcgccttgctatcttccaaaaacatctctgctatcacaacgtccatg
gtaatggacatctgtgagaatttgctgaacatggcagacttcacaccctctgagacagag
acagagctgagcatcaatgagtgtgttcttcctaagccagcccctggttcagacgtcacc
acagagtctttgactgtagggtcgaggctgctcttacctcacatccctgctgtgcttcag
tacctcggcggagttgtgcgcaactccgatcgcatcaaaaagaagaaattccgagctcaa
gttagcaaagaacttaacatcctctccaagatcagtaaatttgtcattgacaaggaacag
agctcaacacttatccatctgctgctaccatacctccataagccaaagattgctgaggag
acagagctggacattctgagcacagtgcagaacctgctgagacaatgttcagagcccagt
gtcttcctgaagcctcttagtaaactcttctccattgtgcacagcaagccatcccgcaaa
gtcctgtgtgaggtcttcaagactctgtctgacctggacaatgaactgaagtacatagtc
gatgttgctgtgcagctaaatgcctttgatagtcggcatctagatgagatccactttgat
gtgcgcctgatggccttccagaagtcaattaaacacattaaagagatgtacacactggac
atgagatacctcatggtcatcatgcacaactgcttccactcttttgaaatcggcgacatg
tctctagcggacagtgccaatctgtgtctttcagctatacttacacagctggctgcagtg
ggctgtcccgagcaggaatataaagagatcgtgcagtacactgtgttggatgctgtgagg
agaggattaaagagcaaaagagagaatgtgaggaacgattacacttcagtcctggcctgt
ctggtgaaaaccttccccaatcgctcagagttcagagacctggtgcagctcactaactac
acagatcccgagtcagacttctttgagcacatgaagcacattcaggtacaccgcagggga
cgagcgctcaggaagtttgccaagcagctgacagaaggcacagtggtgatgacttctcgc
tccatgcagaactttatcatgccctatgccatgattgcactgttcgatgagaaactcctc
aagtatgaagctatgacctccgcagcagtcgatgttattggagcagtgtgtaagcgtctg
acctggtctaaatacctctactacctcaagcattttatccatgtgctccagacaggaata
gttgagcagaaactggctgtaagtttgctgttgattattctggaagcctttcacttcgac
tatgagagtctgagcaaagaaatcgaggcagccaagaacaaaaaggcagacgtgccaaat
gttctggagggagaagcaggagaggaacaagtagaagccatggattcagatgaaagtgac
atggaggatgccatggagaccaatgatgctgatgctgttgccacagaaaccgttggaatg
gacacaggtgaaggtggcgatgccaagcccaaagaaggcacagaggctaagccaaggaaa
gtgctccctgttgttagcagtggccttcctcagagtaaagaggaactggaggctcttatc
tcttccattcatcgcactgtcactcagagcatcttgcccagactacataaatgcctaata
gccaaggtgaagagagatgatgagcataagacggtgaaatcaaaggaagtgaaggatgag
gaggtggtaagagtgcccatcgcctttgctatggtccgactcatgcagactcttccacag
gaagttatggaagccaatttgcctgggatactcctcaaagtgtgtgtccacctgaagagc
cgtttccaggagatccgtgacgtagctcgaaccacactaatcaagattattgaggccttg
gggcatcattacctgcattatcttctcagagagatgcagggtgttcttgtaaagggctat
cagatccatgtattgacctacactgtttaccatctgctctcaatcctgagaccgtcctta
aaacctggagaactcgactcttgcttggacattctgatagagattttcaacaatgagctc
tttggctctcttgcggaggagaaagggatcaaggggattgtttcgaaagtgatggaggcc
cgtcacagcaagagctcagactcgtatgagtttttggctcggttctgcagtcaggagagg
gtcacgcagctcatccttccgctcaaagacattttggagaagacagccagcctgaaggta
tcccggcgtgtgcacagtgttttgaggagagtcgtagcaggacttctgctgaatcagagc
atgacccctcagtcaattctgctgctgagccacggtctggtcagccagagcctgccactc
atcacaagcaagagcaaaccgaagactgctgcacctccagatccccgactgccacctcgc
agctgcttgatcctgccccccaccccgaagagaggcggagcgaaggtggccctcagccgc
aagaccaacatgcacatcttagtggacactggactgagtctgctccatggtagtttgaaa
aattccaaggtcaactcctccgtggctactgtacgggagatgttagacccatttgtctct
cttctgctggactgtctcaactccatgcatgtcaaggtgatcactgagtctcttcaggct
ttcatgtggatcctgaaatttccacttcctgctgtggagcaaaatgctcaccaactcacc
aagcagctgttcgttctgctgaaggactacgctaaagcaggtgctggtcatggagaaaac
ttccaccttgtccagaactgcttcaaggtcataaccgtcatagtgaagagtgtgacgaaa
aactgcatctctgatacacagctgcaagtgctgttgggatatgctgaagaggacatctat
gataattctcgtcaagccactgcatttggcctgctcaaggcaatcctttccaagaagctg
gtcgtaccagagatggaggaggtcatgaaaaaagttgccaaactgtccatcaatggctcg
aatgagcaggtccgcgtccgctgtagacagatctatctgaagtacctcatggattatcca
cttgggaaaaagctgaggaaccattttgactttattgttgctcagctcacgtatgagtac
gacacagggagacagtctgccctcgagatgatggccttcattttccaagcattccctcag
cctcttctcttggagcactgtggactcttctttgtgcctctgtctctggctatggtcaat
gatgattcagcacgctgtaagaaaatggcctctctctccatcaagtcattactgggccag
ttagacgtgaagcaccagaactccatgttcactttggtcaatggctggctgactggagag
aaggtggctctacggagactgggcactcaggtgtgtgggatttttgtcgaagcagaaggg
gagcaatttggtcgcagattggattctctgcttcctctaatagagagggaaatccacact
gccaactttgaagatttcgaagaggaagaaaacgagaaagccgcagataggttactcttc
tactatctcaccctcatcaccaaacttatcaaggactgtggcttcttggagctccacaaa
ccagctgacactctctctagcatctggggtcacatcgaagctcacctgcgttatcctcac
tcctgggtttggttgactgcttctcagatctttggcctgctctttgctgctcagaagcca
gaggagctgctgtctctgtggcactctgagagaaatgccccccaaaacatccagcctgtg
gcttcctcattcctctcaaccaacctggacaagaggatgagggagctcgtcttatcgttc
tgtcaccagctgcagtccaagttcctggacatcagtgctggtgagcaggtaatcaagaac
ctactgttcgtggccaaggtgatctatcttatctcgccagagtctgacttagaagggaat
gaaaaagaagaaggagtaaaagaagttgtggaaaaaaaagaggatggagatgaggagcag
gatgaggacgaggaagaggagcaggatgaggacgaggaagaggagcaggatgaggaagag
gagcaggatgaggacgaggaagaggagcaaaagcaacagaagattatagaagagcaggat
gaaaagccaccttctctgctctgggtgattaagaagctcacgctgcttgctaagagagag
gcagcccacaaccccaaagtgccaatgaaaagaacatgtgtcttcaagttcttgggagcc
atagctgttgacctgggcaaagagcgtctgggcccctacctgactaccatcattgccccg
ctctacagagaactggacagcacgtatgcagaccaagaccccacactgaagaacctggcc
caggagctcattgagctgctgaaaaagatggtggggcttcagaagttctctctcgccttt
gttgctgtgcagaaggaggccacacagagacgagcctcacgcaagaaacacaaggccctg
caggctgtggtcaatcctgacattgccgctaggaaaaagatcaagaagcaccagaagaaa
actgaagcaaagaaaaggaaaatcgcatttttacggccagcacacaaagcaaagaaaagc
aaacgcacttcactcagagacttggctatggttcagtga
DBGET
integrated database retrieval system
