Ictalurus furcatus (blue catfish): 128623419
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Entry
128623419 CDS
T09387
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128623419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128623419
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128623419
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128623419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
128623419
NCBI-ProteinID:
XP_053506442
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All DBs
Position
19:5462686..5487482
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AA seq
521 aa
AA seq
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MFSATRKKFMEGLDNDYPDDSVYYGQSSIFTHRSEKDMLALSSPSSGQLSQLGASLYGSQ
SALGFPMRGMSNNNTQLSRNLAQSMPLPSHGTPTTNVLTMSLHTPSSPSRGILPMNARNM
MNHSQVGQSISMSGRSNSMSSSGLGSPNRISPSIICMPKQQQARQSLTINSMSGFGMGRN
PAFGLSNSFSSSIFNGMDGNENVTGLDLSDFPALADRSQREGSGNPTPLLNPLAGRAPYV
GMVTKPTHEQSQDFSIHNEDFPALPGPNYKDPTCSIDDSKSNLNLSGKNVCNTDGPKFPG
DKILTPQTNNHQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDLGMVHLALG
SDLTTLGLNLNSPENLYPKFASPWASTPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRY
GEDLLFYLYYMNGGDLLQLLAAIELFNRDWRYHKEERVWITRAPGMEPAMKTNTYERGTY
YFFDCLNWRKVAKEFHLEYDKLEERPHVPSTVNYNPAQQAF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgccacgagaaagaagtttatggagggacttgataatgactacccagatgac
agcgtgtactacggccagtcatcgattttcacacatcgatctgagaaagacatgctggca
ttgtcgtctccatcatcgggtcagctgtctcagctgggtgcaagtttatatggctcgcaa
agtgcactgggcttcccgatgagggggatgagcaacaacaacacacaactcagtcgcaac
ttagcacaaagcatgccattacctagtcatggcacacccaccaccaatgtcctgacaatg
tccctccatactccatcctcaccgagtagggggattttgccgatgaatgcgaggaatatg
atgaatcattcgcaggtggggcagagcatatcgatgagtggacggagtaacagcatgagc
agctcaggcctgggcagcccgaaccgtatctcacccagcatcatctgcatgcccaaacag
cagcaggccaggcagtcgctcaccatcaacagtatgtccgggtttggaatgggacgaaat
cctgcgtttggtttaagcaattcattttcaagtagcatctttaacggaatggatggaaat
gaaaacgtgactgggctggacctgtccgattttcctgccttagctgataggagtcaaagg
gaaggaagtggaaatccgaccccactgctcaacccactggctgggagggctccatatgtt
ggaatggtcacaaagccgacacacgagcagtcccaagacttctccatccacaatgaggac
tttcctgcacttcctggacccaactataaggatcccacatgtagtatcgatgatagcaaa
tcgaacttaaacttgtctggtaaaaacgtgtgtaacacagatggtcccaagtttcctgga
gacaaaatcttgacaccacagaccaacaatcatcaaaagaaaggaattcaggtgctacct
gatggccgagtgacgaacattccatctgggatggtgacggatcagtttgggatgattggt
ctgttaacgtttattcgggcagcagagacagacctgggtatggtgcacttagcactgggc
agcgacctgacgacgctcggcctcaaccttaactcaccagaaaacctttatcccaagttt
gcctctccttgggcctccacaccttgccggcctcaagatatcgactttcacgttccgtca
gaatatttaaccaacattcacataagagacaagcttgctgcaataaaactctcacgatac
ggagaggacctgctcttctacctttactacatgaatgggggagacctgttgcagctctta
gcagcaatagagcttttcaatcgggactggaggtatcataaagaggagagggtgtggatc
acgcgagcaccaggaatggaacctgcgatgaagaccaacacctacgaaagagggacgtac
tacttctttgactgccttaactggagaaaagtagccaaggaatttcacctagagtatgac
aaacttgaagagcggccacacgtcccgtccactgtcaactacaacccggcccagcaggcc
ttctga
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