Ictalurus furcatus (blue catfish): 128623538
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Entry
128623538 CDS
T09387
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04150
mTOR signaling pathway
ifu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128623538 (lrp6)
04150 mTOR signaling pathway
128623538 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128623538 (lrp6)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128623538 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
128623538
NCBI-ProteinID:
XP_053506612
LinkDB
All DBs
Position
19:7060413..7106235
Genome browser
AA seq
1634 aa
AA seq
DB search
MKHREQRRREHGRKNMGAVLRTLFLCTFCLQIRAVPLLLYANRRDLRLVDAAQGRAANAT
VVVSGLEDAAAVDFVYSDGLIYWSDVSEEAIKRAVFNGSGSGAQSTVVSGLASPDGLACD
WLGSKLYWTDSETNRIEVSELDGTLRKVVFWQDLDQPRAIALDPGRGYMYWTDWGEIPKI
ERAGMDGTNRGVIIDSDIYWPNGLTLDYSQQKLYWADAKYNFIHRCNLDGTGREVVVKGA
LPHPFALTLYEDTLFWTDWNTHSIHSCQKQTGEERREIHSNIFSPMDIHVFSQKRQLTEV
ASLCSVKNGGCSHLCLLSPVKPYYQCACPTGVQLLEDNKTCRDGATRLLLLARRTDLRRI
SLDTPDFTDIVLHTEDIRHAIAIDYDPVDGHVYWTDDEVHAIRRSRLDGSDAQLLVTSQV
NHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVSGYMYW
TDWGEIPKIERATLDGTERVVMVNTSLGWPNGLALDYTERKIYWGDAKTDKIEMMNMDGT
GRRILVEDKLPHIFGFTLLGDYVYWTDWQRRSIERVHKRTAEREVIIDQLPDLMGLKATY
VHQAFGTNACAENNGGCSHLCLFRPQGVACACPIGLELMGDMSTCIVPEAFLLFSRHTDI
RRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEF
GLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFM
YWTEWGGRPKIDRAAMDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLG
LEREVIADDLPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVF
HSSRQGGWNACASTNGHCSHLCLAVPISSYVCGCPAHYSLNDDNKTCSAPTSFLLFSQKS
AINRMVMDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTV
VSNAVGGHNLGLQPFDLSIDIYSRFIYWTSEVTNVINVTRLDGSRVGVVLRGEHDKPRAI
VVNPERGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPVALAIDNELGKLFWADMD
LRRIESSDLSGANRIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKTTRAGRTKIQ
ARITALTDIHAVHELHVDEYNKHPCTLDNGGCSHICIVKGDGTTRCSCPVHLVLLLDELS
CGEPPTCSPEQFSCTSGEVDCIPQAWRCDGYVECKDESDEHDCPVCSDDEFQCDSKQCVD
LSLRCNGEINCQDRSDENKCDVHCPPDQFTCNNGQCIGKHKKCDHNTDCTDNSDEIGCYP
TEEPSPQPTNTIGSIVGVVMTLFVVGAVYFVCQRVLCPQMKDDGETMTNDFVVHGPSSVP
LGYVPHPSSLSASLPGMSRGKSVIGSLSVMGGSSGPPYDRAHVTGASSSSSSSTKGTYFP
PILNPPPSPATVRSQYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYT
PGRRAQPISSIVMAKGYASDANYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSQ
HLYPPPPSPCTDSS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacagggagcaaaggaggcgagaacacgggaggaaaaacatgggcgcagtgctg
cggactctctttttgtgtactttttgtttgcaaatacgcgccgtgcctctcctcctgtac
gccaacaggcgcgacttgcggctggtggacgcggcccagggacgcgccgccaacgccacg
gtggtggtgagcggcctggaggacgcggcggccgtggacttcgtttacagcgatggtctg
atctactggagcgacgtgagcgaggaggccatcaaacgggccgtcttcaacggctccggc
tccggcgcccagagcacggtggtgtcgggcctggcctcgcccgacggtctggcgtgcgac
tggttagggagtaaactttactggacagactcagaaacgaaccgcatcgaggtatccgag
ctcgacggtacgctcaggaaagtggtgttctggcaggacctggaccagccgagagcgatc
gccctggatccgggcagagggtacatgtactggacagactggggggagatccccaagatc
gagagggcaggtatggatggcacgaatcgaggcgtgatcatcgacagcgatatctactgg
cccaacgggctcacgctggactacagccagcagaagctttactgggccgacgccaagtat
aactttattcatcgctgcaatctggacggcacggggagagaggtggtggtgaagggcgcg
cttccacacccctttgccctaacgctgtacgaagacacgctgttctggaccgactggaat
acgcactccatccactcgtgccagaagcagaccggggaggaacgccgcgagatccactcc
aacatcttctcgcccatggacattcacgtcttcagccaaaagagacagctcacggaagtg
gcgagtctgtgctcggtgaaaaacggcggctgttcgcacctgtgcctgctttctccggtg
aagccgtactaccagtgtgcctgtcccaccggcgtgcagctgctggaggacaacaagacc
tgccgagacggagccacgaggctgcttctcctggcacggcgcacagacctgcgacgcatc
tcgctggacacgccggacttcaccgacatcgtcttgcacaccgaggacatccggcacgcc
atcgccatcgactacgaccctgtagacggccacgtctactggacagacgatgaagtgcac
gcgatccgccgctcccggttggacggcagcgacgcgcagctgctcgtcacctcgcaagtg
aatcacccggacggcatcgccgtggactggatcgcccgcaacctctactggaccgacaca
ggcaccgatcgcatcgaagtgacccgccttaacggtaccatgaggaagatcctgatttcc
gaggacctggatgagcccagagctatcgtcctggatcctgtctcggggtacatgtactgg
accgactggggcgagatccctaagatcgagcgcgctactctggacggaaccgagcgagtc
gtgatggtgaacacttccctgggatggcccaacggcctagcgctcgactacacggagagg
aaaatctactggggggatgctaagaccgacaagatcgagatgatgaacatggacggaacg
ggtcgcaggatcttggtcgaggacaaacttccgcacatatttggcttcaccctgctgggc
gactacgtttactggacggactggcagcggcggagcatcgagcgcgtgcacaagcgcacc
gccgaacgggaagtgatcatcgaccagctgcctgacctcatggggctgaaggccacctac
gtccaccaggctttcgggacgaacgcgtgcgccgagaacaacggcggctgcagtcacctg
tgcctgttcaggccacagggcgtggcatgtgcgtgtcccatcggcctggagctcatgggc
gacatgagcacgtgcattgtgccggaagccttcctgctcttctcacgtcacaccgacatc
cggcgtatctccctcgaaaccaacaacaacaatgtggccatcccgctcactggcgtcaag
gaggcatcagcgctcgacttcgacgttaccgacaaccgcatctactggaccgacatcaca
ctgaagaccatcagccgagcattcatgaacggcagtgcgttggagcatgtggtcgagttt
ggtctggactatccagagggcatggcggtggactggctgggcaagaacctgtactgggct
gacaccggcactaaccgcatcgaggtggcaaagctggatggccagcacaggcaggtcctg
gtgtggaaagacctggacagtccacgagctctagcgctggaccccgctgaaggtttcatg
tactggaccgagtggggtgggagacccaagattgaccgcgcagccatggacggaaccgga
cgcatcacgctggtgcccaacgtgggtcgtgctaacgggctcaccattgactacgctgag
aggcggctctactggaccgacctggacaccacgcttatcgagtcttccaacatgcttggt
cttgagcgtgaggtgatcgcagatgacttgccccacccttttggtctcacgcaataccaa
gactacatttactggacggactggagccagcgcagcatcgagcgtgctaacaaaaccagc
gggcagaaccgcacgctcatccagggccatctggactacgtcatggacatcctggtgttc
cactcgtcacgtcagggaggctggaacgcctgcgcctccaccaacggccactgctcgcac
ctgtgcctggccgtgcccatcagcagttatgtgtgcggctgcccggcgcattactcactc
aacgacgacaacaagacctgcagcgcacccacctctttcctactgttcagccagaagtct
gctattaatcgcatggtaatggatgagcagcagagccctgacatcatcctgcccattcac
agcctgcgcaacgtgcgagccatcgactacgacccgctcgacaagcagctctactggatc
gactccaagcagaacgtcatccgtcgtgcccaggaggacggcaatcagagtatgaccgtg
gtgtccaacgcggtggggggccacaatctgggcttgcaaccgtttgacctgagcatcgac
atctacagccgcttcatctactggaccagcgaggtgaccaacgtaatcaacgtgacgcgc
ctcgacggctcgcgtgtcggagtggtgctccgtggagagcacgacaagccccgggccatt
gtggttaaccccgagagagggtacatgtacttcaccaacctgcaggagcgctctcctaag
atcgagcgggcagctctggacggcactgagcgagaggtgctgttcttcagtggcctgagc
aaacctgtcgccctcgccatcgacaacgagctgggcaaactcttctgggccgacatggac
ctgcgtcgcatcgagagcagcgatctatctggcgccaaccggattgtgatcgaggactcc
aacatactgcagccagtgggtttgacggtgttcggaaaccacctctactggatcgatcgt
cagcagcagatgatcgagcgcatcgacaagacgacgcgagcgggacgcacgaaaatccaa
gctcggatcaccgcccttacggacatccacgcggtccacgagcttcacgtggacgagtac
aataaacacccctgtaccttagacaacggaggatgctcccacatctgtatcgtgaagggg
gatggaacgacgcgctgctcctgccctgttcacctggtcctcctgctggacgaactttcc
tgtggagagccgcccacgtgttccccggagcagttctcgtgcacctcgggagaggtggac
tgcatcccgcaggcctggcgctgcgacgggtacgtcgagtgcaaagacgaaagcgacgag
cacgactgccccgtgtgctcggacgacgagtttcagtgcgacagcaagcagtgcgtggac
ctctcgctgcgctgcaacggagagatcaactgccaggaccgctcggacgagaacaagtgc
gacgttcattgccctccggatcagttcacctgtaacaacggtcagtgcattggcaagcac
aagaagtgcgaccataacacggactgcacagacaactcggatgaaattggctgctacccc
acagaggagccttccccccagcccaccaacaccatcggctccatcgtcggcgtggtgatg
acgctgttcgtcgtgggcgccgtgtacttcgtgtgtcagcgcgtcctctgcccacagatg
aaggacgacggcgagaccatgaccaacgattttgtcgtgcacgggccgtcctctgtgccg
ctgggctacgtgccgcatccgagctccctgtccgcctcccttccaggcatgtctcgtggg
aagtctgtgattggctcgttgagcgtcatgggcggaagcagcggaccgccgtacgaccgt
gctcacgtaacgggtgcttcctccagcagctcgtccagcactaagggcacttactttcct
cctatcctgaaccctcctccttctccagctacagtgcgctctcagtacacaatggagttc
ggctactcgtccaacagtccctccacacaccgctcgtacagctacagaccatacagctac
cggcacttcgctcctccgaccacgccgtgcagcacagacgtatgcgacagcgactacacg
cccggccgcagagcacagcccatctcctccatcgtcatggccaagggctacgcaagcgac
gccaactacgactcggagccgttcccgccaccacccacgccgcgcagccagtacctgtca
gccgaggagaactgcgaaagctgcccgccctcgccgtacacagagcgcagctactcgcag
cacctgtaccctccgcctccctcaccctgcaccgactcgtcctga
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integrated database retrieval system