KEGG   Ictalurus furcatus (blue catfish): 128623538
Entry
128623538         CDS       T09387                                 
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
  KO
K03068  low density lipoprotein receptor-related protein 5/6
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04150  mTOR signaling pathway
ifu04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128623538 (lrp6)
   04150 mTOR signaling pathway
    128623538 (lrp6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128623538 (lrp6)
Membrane trafficking [BR:ifu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    128623538 (lrp6)
SSDB
Motif
Pfam: Ldl_recept_b FXa_inhibition Ldl_recept_a Vgb_lyase SGL DUF5050 EGF_LRP2 cEGF EGF
Other DBs
NCBI-GeneID: 128623538
NCBI-ProteinID: XP_053506612
LinkDB
Position
19:7060413..7106235
AA seq 1634 aa
MKHREQRRREHGRKNMGAVLRTLFLCTFCLQIRAVPLLLYANRRDLRLVDAAQGRAANAT
VVVSGLEDAAAVDFVYSDGLIYWSDVSEEAIKRAVFNGSGSGAQSTVVSGLASPDGLACD
WLGSKLYWTDSETNRIEVSELDGTLRKVVFWQDLDQPRAIALDPGRGYMYWTDWGEIPKI
ERAGMDGTNRGVIIDSDIYWPNGLTLDYSQQKLYWADAKYNFIHRCNLDGTGREVVVKGA
LPHPFALTLYEDTLFWTDWNTHSIHSCQKQTGEERREIHSNIFSPMDIHVFSQKRQLTEV
ASLCSVKNGGCSHLCLLSPVKPYYQCACPTGVQLLEDNKTCRDGATRLLLLARRTDLRRI
SLDTPDFTDIVLHTEDIRHAIAIDYDPVDGHVYWTDDEVHAIRRSRLDGSDAQLLVTSQV
NHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVSGYMYW
TDWGEIPKIERATLDGTERVVMVNTSLGWPNGLALDYTERKIYWGDAKTDKIEMMNMDGT
GRRILVEDKLPHIFGFTLLGDYVYWTDWQRRSIERVHKRTAEREVIIDQLPDLMGLKATY
VHQAFGTNACAENNGGCSHLCLFRPQGVACACPIGLELMGDMSTCIVPEAFLLFSRHTDI
RRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEF
GLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFM
YWTEWGGRPKIDRAAMDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLG
LEREVIADDLPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVF
HSSRQGGWNACASTNGHCSHLCLAVPISSYVCGCPAHYSLNDDNKTCSAPTSFLLFSQKS
AINRMVMDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTV
VSNAVGGHNLGLQPFDLSIDIYSRFIYWTSEVTNVINVTRLDGSRVGVVLRGEHDKPRAI
VVNPERGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPVALAIDNELGKLFWADMD
LRRIESSDLSGANRIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKTTRAGRTKIQ
ARITALTDIHAVHELHVDEYNKHPCTLDNGGCSHICIVKGDGTTRCSCPVHLVLLLDELS
CGEPPTCSPEQFSCTSGEVDCIPQAWRCDGYVECKDESDEHDCPVCSDDEFQCDSKQCVD
LSLRCNGEINCQDRSDENKCDVHCPPDQFTCNNGQCIGKHKKCDHNTDCTDNSDEIGCYP
TEEPSPQPTNTIGSIVGVVMTLFVVGAVYFVCQRVLCPQMKDDGETMTNDFVVHGPSSVP
LGYVPHPSSLSASLPGMSRGKSVIGSLSVMGGSSGPPYDRAHVTGASSSSSSSTKGTYFP
PILNPPPSPATVRSQYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYT
PGRRAQPISSIVMAKGYASDANYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSQ
HLYPPPPSPCTDSS
NT seq 4905 nt   +upstreamnt  +downstreamnt
atgaaacacagggagcaaaggaggcgagaacacgggaggaaaaacatgggcgcagtgctg
cggactctctttttgtgtactttttgtttgcaaatacgcgccgtgcctctcctcctgtac
gccaacaggcgcgacttgcggctggtggacgcggcccagggacgcgccgccaacgccacg
gtggtggtgagcggcctggaggacgcggcggccgtggacttcgtttacagcgatggtctg
atctactggagcgacgtgagcgaggaggccatcaaacgggccgtcttcaacggctccggc
tccggcgcccagagcacggtggtgtcgggcctggcctcgcccgacggtctggcgtgcgac
tggttagggagtaaactttactggacagactcagaaacgaaccgcatcgaggtatccgag
ctcgacggtacgctcaggaaagtggtgttctggcaggacctggaccagccgagagcgatc
gccctggatccgggcagagggtacatgtactggacagactggggggagatccccaagatc
gagagggcaggtatggatggcacgaatcgaggcgtgatcatcgacagcgatatctactgg
cccaacgggctcacgctggactacagccagcagaagctttactgggccgacgccaagtat
aactttattcatcgctgcaatctggacggcacggggagagaggtggtggtgaagggcgcg
cttccacacccctttgccctaacgctgtacgaagacacgctgttctggaccgactggaat
acgcactccatccactcgtgccagaagcagaccggggaggaacgccgcgagatccactcc
aacatcttctcgcccatggacattcacgtcttcagccaaaagagacagctcacggaagtg
gcgagtctgtgctcggtgaaaaacggcggctgttcgcacctgtgcctgctttctccggtg
aagccgtactaccagtgtgcctgtcccaccggcgtgcagctgctggaggacaacaagacc
tgccgagacggagccacgaggctgcttctcctggcacggcgcacagacctgcgacgcatc
tcgctggacacgccggacttcaccgacatcgtcttgcacaccgaggacatccggcacgcc
atcgccatcgactacgaccctgtagacggccacgtctactggacagacgatgaagtgcac
gcgatccgccgctcccggttggacggcagcgacgcgcagctgctcgtcacctcgcaagtg
aatcacccggacggcatcgccgtggactggatcgcccgcaacctctactggaccgacaca
ggcaccgatcgcatcgaagtgacccgccttaacggtaccatgaggaagatcctgatttcc
gaggacctggatgagcccagagctatcgtcctggatcctgtctcggggtacatgtactgg
accgactggggcgagatccctaagatcgagcgcgctactctggacggaaccgagcgagtc
gtgatggtgaacacttccctgggatggcccaacggcctagcgctcgactacacggagagg
aaaatctactggggggatgctaagaccgacaagatcgagatgatgaacatggacggaacg
ggtcgcaggatcttggtcgaggacaaacttccgcacatatttggcttcaccctgctgggc
gactacgtttactggacggactggcagcggcggagcatcgagcgcgtgcacaagcgcacc
gccgaacgggaagtgatcatcgaccagctgcctgacctcatggggctgaaggccacctac
gtccaccaggctttcgggacgaacgcgtgcgccgagaacaacggcggctgcagtcacctg
tgcctgttcaggccacagggcgtggcatgtgcgtgtcccatcggcctggagctcatgggc
gacatgagcacgtgcattgtgccggaagccttcctgctcttctcacgtcacaccgacatc
cggcgtatctccctcgaaaccaacaacaacaatgtggccatcccgctcactggcgtcaag
gaggcatcagcgctcgacttcgacgttaccgacaaccgcatctactggaccgacatcaca
ctgaagaccatcagccgagcattcatgaacggcagtgcgttggagcatgtggtcgagttt
ggtctggactatccagagggcatggcggtggactggctgggcaagaacctgtactgggct
gacaccggcactaaccgcatcgaggtggcaaagctggatggccagcacaggcaggtcctg
gtgtggaaagacctggacagtccacgagctctagcgctggaccccgctgaaggtttcatg
tactggaccgagtggggtgggagacccaagattgaccgcgcagccatggacggaaccgga
cgcatcacgctggtgcccaacgtgggtcgtgctaacgggctcaccattgactacgctgag
aggcggctctactggaccgacctggacaccacgcttatcgagtcttccaacatgcttggt
cttgagcgtgaggtgatcgcagatgacttgccccacccttttggtctcacgcaataccaa
gactacatttactggacggactggagccagcgcagcatcgagcgtgctaacaaaaccagc
gggcagaaccgcacgctcatccagggccatctggactacgtcatggacatcctggtgttc
cactcgtcacgtcagggaggctggaacgcctgcgcctccaccaacggccactgctcgcac
ctgtgcctggccgtgcccatcagcagttatgtgtgcggctgcccggcgcattactcactc
aacgacgacaacaagacctgcagcgcacccacctctttcctactgttcagccagaagtct
gctattaatcgcatggtaatggatgagcagcagagccctgacatcatcctgcccattcac
agcctgcgcaacgtgcgagccatcgactacgacccgctcgacaagcagctctactggatc
gactccaagcagaacgtcatccgtcgtgcccaggaggacggcaatcagagtatgaccgtg
gtgtccaacgcggtggggggccacaatctgggcttgcaaccgtttgacctgagcatcgac
atctacagccgcttcatctactggaccagcgaggtgaccaacgtaatcaacgtgacgcgc
ctcgacggctcgcgtgtcggagtggtgctccgtggagagcacgacaagccccgggccatt
gtggttaaccccgagagagggtacatgtacttcaccaacctgcaggagcgctctcctaag
atcgagcgggcagctctggacggcactgagcgagaggtgctgttcttcagtggcctgagc
aaacctgtcgccctcgccatcgacaacgagctgggcaaactcttctgggccgacatggac
ctgcgtcgcatcgagagcagcgatctatctggcgccaaccggattgtgatcgaggactcc
aacatactgcagccagtgggtttgacggtgttcggaaaccacctctactggatcgatcgt
cagcagcagatgatcgagcgcatcgacaagacgacgcgagcgggacgcacgaaaatccaa
gctcggatcaccgcccttacggacatccacgcggtccacgagcttcacgtggacgagtac
aataaacacccctgtaccttagacaacggaggatgctcccacatctgtatcgtgaagggg
gatggaacgacgcgctgctcctgccctgttcacctggtcctcctgctggacgaactttcc
tgtggagagccgcccacgtgttccccggagcagttctcgtgcacctcgggagaggtggac
tgcatcccgcaggcctggcgctgcgacgggtacgtcgagtgcaaagacgaaagcgacgag
cacgactgccccgtgtgctcggacgacgagtttcagtgcgacagcaagcagtgcgtggac
ctctcgctgcgctgcaacggagagatcaactgccaggaccgctcggacgagaacaagtgc
gacgttcattgccctccggatcagttcacctgtaacaacggtcagtgcattggcaagcac
aagaagtgcgaccataacacggactgcacagacaactcggatgaaattggctgctacccc
acagaggagccttccccccagcccaccaacaccatcggctccatcgtcggcgtggtgatg
acgctgttcgtcgtgggcgccgtgtacttcgtgtgtcagcgcgtcctctgcccacagatg
aaggacgacggcgagaccatgaccaacgattttgtcgtgcacgggccgtcctctgtgccg
ctgggctacgtgccgcatccgagctccctgtccgcctcccttccaggcatgtctcgtggg
aagtctgtgattggctcgttgagcgtcatgggcggaagcagcggaccgccgtacgaccgt
gctcacgtaacgggtgcttcctccagcagctcgtccagcactaagggcacttactttcct
cctatcctgaaccctcctccttctccagctacagtgcgctctcagtacacaatggagttc
ggctactcgtccaacagtccctccacacaccgctcgtacagctacagaccatacagctac
cggcacttcgctcctccgaccacgccgtgcagcacagacgtatgcgacagcgactacacg
cccggccgcagagcacagcccatctcctccatcgtcatggccaagggctacgcaagcgac
gccaactacgactcggagccgttcccgccaccacccacgccgcgcagccagtacctgtca
gccgaggagaactgcgaaagctgcccgccctcgccgtacacagagcgcagctactcgcag
cacctgtaccctccgcctccctcaccctgcaccgactcgtcctga

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