Ictalurus furcatus (blue catfish): 128623566
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Entry
128623566 CDS
T09387
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128623566
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128623566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
128623566
NCBI-ProteinID:
XP_053506649
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Position
19:complement(5952608..5971472)
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AA seq
892 aa
AA seq
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MGVNDLWSILSPVQESVPLYSLTGKTLAVDLSLWVCEAQHVQGMMGKVTKPHLRNLFFRA
SSLLRMGIKLVFVMEGEAPKIKAETMSKRTGMRFWGSKSKSVPKPATAKNTSRVRFKAVL
RECAEMLDYLGIPWVSAAGEAEAMCAFMDAQGLVDGCITSDGDAFLYGAQTVYRNFNMNT
KDPQIDCYKMSRVETELQLKRETLVGLAVLLGCDYIPKGVPGVGKEHALKLIQSLKETTL
LQKFSDWRKTASETQEFAVKKVTHCLVCRHPGSAKSHERRGCVYCGSEKFCQPQDYDSQC
PCDWHRTEHTRQASSVETLIKRKTLACDKFPFTEIINEFLVPKDKAVNGFKRWKPNLLLM
QNFALEKMEWPKHYTSEKVLALMTYTELVNRSQGTQSSTQIQPIRIYKRRIRNGVSCFEI
MWHKPDHYVFPEDCPQDESDVVRTVEEENLFTVAFPDIVQLFHKETAEAKDNKLKKKKPK
AEKEKPVVSSDGVSDLFAKMSLKGSSHLKPLVPSGKGLQTITVLESDPHHCSSATLTTAS
KFTKHANCHEIQSVPNAPLPSFIQQPEVLASPCQTGTLSQAQSCLSVSVVIDELHLNSID
WDALSFTATPSPQSQHSKADPQPVNKSNEGTKMEGRDSSTAVRSDCAAPQTDRLSERSLM
ERVHLRKMMECSGSQNNKEKESKVQSVDSELKYTSGLSHKPLSENPKVPPHSRYQKSELG
RINTVASDSKEKTFTKMQQAKDSFPVPVPHKYKFVKPKHFNRPSNVPEQTNKESACKKSV
CRRQGSSSDNSDVENLPQSKLKAKVEPKARIVQKTVLAQQLIKQDRCDMFPNSVGTHHGS
DSTTPEKQPHNTGFSRTNPRTQTCSAKSDDEADASICSPLPLAERLKLKFNK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgatctgtggtcgatcctgagtccggtgcaggaatctgttccgttatac
agtctcacgggaaaaactctggctgtggatctcagtctgtgggtctgtgaagcccagcac
gtccaaggcatgatgggcaaagtcacaaaacctcatctacgcaatttgtttttccgtgca
tcttctctccttcggatgggcatcaagctcgtttttgttatggaaggagaagctcctaag
atcaaggcggagactatgagcaagaggacggggatgaggttctggggcagtaaaagcaag
agcgtcccgaaaccggcaacagccaaaaacaccagcagagtgcgctttaaagctgtgctt
agagagtgtgctgagatgttagactatctgggcataccgtgggtgtctgcagcaggcgag
gcagaggccatgtgtgcgtttatggatgcacagggattggtggacggctgcattaccagt
gatggggacgctttcctgtatggtgcacaaactgtctacagaaacttcaacatgaacaca
aaggaccctcagattgactgctataagatgtccagagtggagacggagctgcagctgaag
agagagacactcgtgggcctggctgtgctcctcggctgtgactacatacctaaaggtgtt
ccaggtgtcggcaaagaacatgctcttaaattaatacagagtttaaaagaaacaactctt
cttcaaaaattcagtgattggaggaaaactgcttccgagactcaggagtttgctgtgaag
aaggtcacccactgcctggtgtgtcgtcaccctggttctgctaaatctcatgagcgcagg
ggctgtgtgtactgtggcagtgagaagttctgtcagcctcaggactacgactcgcagtgt
ccctgcgactggcaccgcactgagcacactcgccaggcctcctccgtcgaaacactcatc
aaaaggaaaaccctggcctgtgacaagttccctttcacagagatcatcaacgaatttctg
gttccaaaggacaaagctgtgaatggttttaaaagatggaaacccaacctactcctcatg
cagaattttgcgctggagaagatggagtggcccaaacattacaccagcgagaaagtcctt
gcgctgatgacctacactgaacttgtgaacagaagtcaagggacacaatcgtcaacacag
atacaacccattcgaatatacaagcggcgcataaggaatggagtctcctgctttgaaatc
atgtggcataaaccagatcattatgtatttcccgaggactgccctcaggacgagtctgat
gtagtgagaaccgtggaagaggaaaacctgtttaccgtggcgttccctgacatcgtccag
ctcttccacaaggaaacagcagaggccaaggacaacaaattaaagaaaaagaaaccgaag
gcagaaaaagagaagccagttgtttcttctgatggagtgtctgatctttttgctaagatg
tctctgaaaggttcttcgcatctcaaacccctcgtaccctcagggaaaggcttacagacg
ataaccgttttagagtctgatcctcaccactgttcctctgcaacactaactacagcatcg
aaattcactaaacatgctaattgtcatgaaatccagtcagtccccaatgcccctcttccc
tcatttatacaacaaccagaggttctagcttcaccctgccaaacagggacattatctcag
gcccagagttgcctttcagtatctgtagtgattgatgagcttcacttgaatagtatagac
tgggatgctttgtccttcactgctaccccatctcctcagtctcagcacagcaaagctgat
cctcaaccagtgaacaaatcaaacgaaggaaccaaaatggaaggccgtgactcatctact
gctgttcggtcagactgtgcagctccgcagactgacagactttcagagcgttcactgatg
gaaagagtccatttgaggaaaatgatggagtgttctggttctcagaataataaagagaag
gaatccaaagttcaaagtgttgattctgaactgaaatacacttcaggtttaagccacaag
ccattgtctgagaatcctaaagttccacctcactcacggtatcaaaaatcagagcttggc
agaattaacactgtggcttctgattcaaaggaaaaaacattcacaaaaatgcagcaggcc
aaagattctttccctgtcccagtaccacataaatacaaatttgttaaaccaaaacacttc
aacagaccatccaacgttcctgagcagacaaataaagaaagcgcatgtaagaagagtgtt
tgtagaagacaaggttcttccagtgataacagtgacgtggagaatctgccccaaagcaaa
ctgaaagccaaggttgagcctaaagcacggattgtacaaaaaactgttctagcacaacag
cttattaaacaggacaggtgtgatatgtttccaaattctgtaggcacacatcacggctca
gactccacaactcctgaaaaacaaccacacaacacgggcttctcgagaacaaatccacga
acacagacatgcagcgcaaagagtgatgatgaggcagatgcttcgatctgtagtcctttg
ccactagcagagaggctgaaacttaaatttaacaaataa
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