Ictalurus furcatus (blue catfish): 128623654
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Entry
128623654 CDS
T09387
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128623654 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128623654 (taf3)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128623654 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
128623654
NCBI-ProteinID:
XP_053506770
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All DBs
Position
19:9635561..9715357
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AA seq
876 aa
AA seq
DB search
MCESYARSLMRVAVAQLCQALGWDAVQLSACELLSDVLERYLQQLARGCHRYSELYGRTD
PGLSDLEQAFGLMGVSVAELEDYINNLEPVGFFHSIPQFPISKSSLLQFPTSSFDTDVRN
ALRGDKRDYIPEYLPPLAPLHQDEEEEEQVPADMGTSAEAMQVSLGEEEEGEDEENDENW
LGPRVSDSPRPEGLLPAAKRPRLGTKPGSSPEWSFEPREPLSSLNAQHMARSPSPSLPLE
MVRPSALTPTPGQKPKVSSLSPARQKNKSPKRVIGATPSAISARPSSVTPPKSAQKAGKR
SPGRPRSPRSPRPGPTQLGRGWLIPNTDEVSQDGELKDEAIEDSIAAVIARACAGGVGVA
DPFAYDSDSDSEGFPKSPPKHMPKHTLPQPKLTPVLGVKHPPLMTPTLLSAGPNRWTMDD
SIDEVIRKANQGQGLPCQSPPEPPYFSTPSDSPPTPPPPALNPPQERKDPVASSLLKKKL
KKDIKTKLKKKDRERLKEKGKDKSKNKEKNKEKKREKDRGQGEDGKTPWTELSLGTEERR
DGAGGKKEKDKHKDKKKDKEKSKKDKEKRDKGKERGGKEEKRLSLAAKESASASLPLFSP
SSCLRVPSMLPPLQPILPETLFHPKETKSKEKDKKKDKKEKKKKKDKEKERDKDRERERP
REKEEKKKEKEKEKKEKVKEKEKPKVEKPGLMVEAPVVPQSPVIPRLKLKVGAGQDKIVI
SKVTPDLEPTPPPPRTPVSRSGPGARMRSPPALPPPVPPPVIPAPLPPPVLVPPPPPPVF
QAPASQAKARGCSVVTETVSAYVIRDEWGNKIWICPGCNKPDDGSPMIGCDECDDWYHWP
CVGIIAAPPEDQSWYCVKCSGKKKDKKTKKRKRKAH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagctatgcgcgctcgctgatgcgggtggcggtggcgcagctgtgccaggcg
ctgggctgggacgcggtgcagctctccgcctgcgagctgctctccgacgtgctggagcgc
tacctgcagcagctagcccgaggctgccaccgctactccgagctgtacgggcggacagac
cctgggctgagtgaccttgagcaggcctttgggctgatgggggtgagtgtcgcggagctt
gaagactacattaacaacttggagccagtggggttcttccactccatcccccagttcccc
atcagcaagagcagcttgctgcagttccccacctccagcttcgacacagatgtccgcaac
gccctgcgtggagacaagagggactacatcccagaatacctccctcccctcgccccacta
caccaagatgaagaggaggaggagcaggtccctgcagacatgggcacgtcggccgaggcc
atgcaggtgtctcttggcgaggaagaggagggtgaggatgaagagaacgatgagaactgg
cttggcccacgtgtgtcagatagccccagacctgaaggtcttttacctgctgcgaagcga
ccacgcctgggaaccaaaccaggaagcagccccgaatggagctttgagcctcgcgaacct
cttagttcactcaacgcccagcacatggcacgctccccttccccttcactgcccctcgaa
atggttcgtccctctgcgttgactccaactccaggacaaaaacccaaagtctcctccctt
tctcctgctcgccagaagaataaatcacccaaaagagtgattggtgccaccccttctgcc
atatctgcccgtccttcttcagtaacaccacccaaaagtgcgcagaaggcagggaaaagg
tcgcctgggagacccagaagccctcgtagccctcggccagggcccacgcagttaggacgt
ggatggttgatccctaacacagatgaggtttcgcaggacggcgagctcaaagacgaggcc
attgaggactccattgcagcggttatagccagggcgtgtgcaggcggagtgggtgtggct
gacccgttcgcgtatgactcagactcagacagcgaggggtttccaaagagcccgcccaaa
catatgcccaaacacacactcccccaaccaaaactcacacctgtccttggtgtaaaacac
ccacccttgatgacgccaacgttgctctcagccggcccaaaccgctggaccatggatgac
tccatagatgaggtcatcagaaaggccaaccagggacagggtctgccttgtcaatcacca
ccagagcccccctacttctccaccccgtccgactctccgcccaccccgccacctccagct
ctcaaccccccacaggagcgaaaagatcccgtggcctcgtctctcctaaagaaaaaactc
aagaaagatatcaaaactaagctgaaaaagaaggaccgagagcggctaaaggagaaggga
aaagacaaaagcaagaataaagagaaaaacaaggagaagaagagagagaaggatcgaggc
cagggggaggacggaaagactccttggacagagttatcgctcggaacagaggagaggaga
gacggtgctggagggaagaaggagaaggacaagcacaaggacaagaagaaagataaagag
aagagcaagaaggacaaagagaaaagagacaagggcaaggagagaggtgggaaggaggag
aagaggctgtcgcttgcagccaaggaaagcgcctctgcttcactacctctctttagccct
tcttcctgcctgcgtgtcccctcgatgcttcccccactgcaacccatcctccctgaaaca
ctgttccaccccaaagagaccaagagcaaggagaaggacaagaagaaagacaaaaaggag
aaaaagaagaagaaagacaaggagaaggaacgagacaaggacagggagcgggagcggccc
agggagaaggaggagaagaagaaggagaaagagaaagagaagaaagaaaaagtcaaagaa
aaagagaagcccaaagtggagaagcctggtttaatggttgaagcccccgtggttcctcag
tctcccgtcatacccagactaaagctgaaagttggagccggacaggacaaaatcgtcatc
agtaaggtaacccctgacctggaacctaccccaccacctcctcggacgccggtgtcgcgc
tccggtcccggtgctcggatgcgttctcctcctgcacttcctccccctgtcccacctcca
gtcatccctgcacctctcccaccacctgtgttggtgccaccccctccgcctccggtgttt
caggccccagccagccaggctaaagctcgtggctgcagcgtcgtcacggagacggtcagc
gcttacgtgattcgtgacgagtggggtaataagatctggatctgccctggctgtaataaa
cctgatgatggcagtcccatgatcggctgtgatgagtgcgatgactggtatcactggccc
tgtgtaggaatcatagctgctcccccagaggatcagtcctggtactgtgtgaagtgttct
ggcaagaaaaaagacaaaaaaacaaaaaagaggaaacgtaaagcgcactga
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