Ictalurus furcatus (blue catfish): 128623828
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Entry
128623828 CDS
T09387
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128623828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128623828
Membrane trafficking [BR:
ifu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
128623828
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
SNARE
ATG17_like
PspA_IM30
Ferritin
Spectrin_Anc-1
Spectrin_Anc-1_2
DUF5856
Lzipper-MIP1
Baculo_PEP_C
Mod_r
Motif
Other DBs
NCBI-GeneID:
128623828
NCBI-ProteinID:
XP_053506912
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Position
20:4236035..4337063
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AA seq
310 aa
AA seq
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MKDRTHELRHGKDTEEEEEVAVGMEKGFMDEFFEQVEEIRGYIDSLAEKVEEVKRKHSAI
LAAPNPDEKTKTELEELMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQHS
TLSRKFVEVMSEYNATQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGI
IMDSNITQQAMNEIETRHNEIIKLETSIRELHDMFMDMAMLVESQGGLLNNIESNVRNAQ
EYVEKAKEDTKAALKVQKTSKVVSNALISPQLLSKIPLSFSLFPVLFLPSSPLPPPLSCS
SYCVCAVRER
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcacgcacgagctgaggcatgggaaggacactgaggaggaggaggaggtg
gcagtgggcatggagaaaggcttcatggatgagttctttgaacaggtggaagagatacgt
ggctacattgactcactggctgagaaggtagaggaggtaaagcggaaacacagtgccatc
cttgccgcgccaaatccagacgaaaaaacaaaaacagaactggaggagctgatgacagac
atcaagaagctggctaacaaagtgcgctccaagttaaagagtatccagcagaccatcgag
caggaggaaggacagaacaggtcttcagctgatttgaggatacggaagacacaacactcc
actctgtcacgtaaattcgtggaggtgatgtccgagtacaacgcgacgcaatcgagttac
cgggagcgctgcaagggccggatccagagacagctggagatcactggaaggaacacgaca
aacgaggagctagaaagcatgctggaaagtgacaacccagctatcttcacatcggggatc
atcatggactccaacatcacccagcaggccatgaacgaaatcgaaacccgtcacaatgag
atcatcaagctggagaccagcatccgcgagctgcacgacatgttcatggacatggccatg
ctggtcgagagtcagggtgggctcctgaacaacattgaatcaaatgtgcgtaacgcccag
gaatatgtggaaaaagccaaagaagacactaaagctgctcttaaagtgcaaaaaacaagc
aaggtggtgagtaacgccttaatcagtccacagctgctgtctaaaatccctctctctttc
tctctttttcctgtcctttttcttccttcttccccacttcctccccctctgtcctgctcg
tcatactgcgtgtgtgcggtcagggagagatga
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