KEGG   Ictalurus furcatus (blue catfish): 128623828
Entry
128623828         CDS       T09387                                 
Name
(RefSeq) syntaxin-1A isoform X1
  KO
K04560  syntaxin 1A
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    128623828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128623828
Membrane trafficking [BR:ifu04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    128623828
SSDB
Motif
Pfam: Syntaxin Syntaxin_2 SNARE ATG17_like PspA_IM30 Ferritin Spectrin_Anc-1 Spectrin_Anc-1_2 DUF5856 Lzipper-MIP1 Baculo_PEP_C Mod_r
Other DBs
NCBI-GeneID: 128623828
NCBI-ProteinID: XP_053506912
LinkDB
Position
20:4236035..4337063
AA seq 310 aa
MKDRTHELRHGKDTEEEEEVAVGMEKGFMDEFFEQVEEIRGYIDSLAEKVEEVKRKHSAI
LAAPNPDEKTKTELEELMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQHS
TLSRKFVEVMSEYNATQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGI
IMDSNITQQAMNEIETRHNEIIKLETSIRELHDMFMDMAMLVESQGGLLNNIESNVRNAQ
EYVEKAKEDTKAALKVQKTSKVVSNALISPQLLSKIPLSFSLFPVLFLPSSPLPPPLSCS
SYCVCAVRER
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaggaccgcacgcacgagctgaggcatgggaaggacactgaggaggaggaggaggtg
gcagtgggcatggagaaaggcttcatggatgagttctttgaacaggtggaagagatacgt
ggctacattgactcactggctgagaaggtagaggaggtaaagcggaaacacagtgccatc
cttgccgcgccaaatccagacgaaaaaacaaaaacagaactggaggagctgatgacagac
atcaagaagctggctaacaaagtgcgctccaagttaaagagtatccagcagaccatcgag
caggaggaaggacagaacaggtcttcagctgatttgaggatacggaagacacaacactcc
actctgtcacgtaaattcgtggaggtgatgtccgagtacaacgcgacgcaatcgagttac
cgggagcgctgcaagggccggatccagagacagctggagatcactggaaggaacacgaca
aacgaggagctagaaagcatgctggaaagtgacaacccagctatcttcacatcggggatc
atcatggactccaacatcacccagcaggccatgaacgaaatcgaaacccgtcacaatgag
atcatcaagctggagaccagcatccgcgagctgcacgacatgttcatggacatggccatg
ctggtcgagagtcagggtgggctcctgaacaacattgaatcaaatgtgcgtaacgcccag
gaatatgtggaaaaagccaaagaagacactaaagctgctcttaaagtgcaaaaaacaagc
aaggtggtgagtaacgccttaatcagtccacagctgctgtctaaaatccctctctctttc
tctctttttcctgtcctttttcttccttcttccccacttcctccccctctgtcctgctcg
tcatactgcgtgtgtgcggtcagggagagatga

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