Ictalurus furcatus (blue catfish): 128623854
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Entry
128623854 CDS
T09387
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128623854 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128623854 (rpp40)
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128623854 (rpp40)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128623854 (rpp40)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
128623854 (rpp40)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
128623854 (rpp40)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
128623854 (rpp40)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
128623854 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
128623854
NCBI-ProteinID:
XP_053506961
LinkDB
All DBs
Position
20:complement(7716978..7726113)
Genome browser
AA seq
357 aa
AA seq
DB search
MLSDLEKCPRRLLVCEKSSFLNEASRHEAHVSKHSFNYKISLLIPECGVLPAEIAKVISN
FSSYHLVRDLPVYRFLEEDMLEIIKKGSFYALSYKTRLDEDNIIAVLSRKLILSLDKDTY
EQLGMEGKPSLYNHRKPMRYVVTVDLTDKSLAPGAKRYQQVLLSLKERVPLRSDFLLTDC
HSDRDGHLKVLLSQYTYEKCRPTLSTHNLRDLLCPSLQSSDLQGKRLSCTPEHFLEWLGA
VNLNISCENSAASFLSTYACPEPCSSVSQVLLCTVTGLIPPEDISSLLQELRSYFDAPKF
TDWVSLTVHGFVDSPVCWGTTEHGFLKGGENFYNFVCFKNQDYWLHMATGAHDGCPP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagacttggagaaatgcccgaggaggttattagtctgtgaaaaatccagcttc
ttgaatgaagcatcacgtcatgaagcgcacgtgtccaaacacagcttcaactataagatt
tccttactgatacctgaatgtggagtattgcctgctgagatagcaaaagttatcagtaat
ttcagttcatatcaccttgttcgggatctaccagtttacagattcctggaagaggacatg
cttgaaataattaagaaaggcagtttttatgccctctcgtacaaaaccaggcttgatgaa
gacaatattattgctgttttgagcagaaagttgatattgtctcttgataaggacacatat
gagcagcttggcatggagggaaaaccatctctatacaatcacagaaagcccatgagatat
gttgtaactgtggacctcactgataaatctttggctcctggtgcaaagcgataccagcaa
gttctgctaagtttaaaagaaagagtgccactgagaagtgactttcttttaacagattgc
cattcagaccgagatggacatctgaaggttctcctgtctcaatacacatacgagaagtgt
aggcctactcttagtacccacaatctgagagatctgttgtgcccatcacttcagtcttca
gatcttcagggaaagagactttcatgcaccccagagcacttcctggagtggctgggggca
gtgaacctaaatataagttgtgaaaactcagctgcaagtttcctgtccacatatgcatgt
ccggagccatgcagttctgtgagccaggtcctgctttgcacagtaactggactcatccct
cctgaagacatctcttcactattacaagagcttagaagttattttgatgcaccaaagttt
acagactgggtctccctcactgtgcatggctttgtggatagtcctgtgtgctggggaaca
acggaacatggcttcctcaaggggggagaaaacttctacaattttgtttgcttcaagaac
caggattactggttgcacatggccactggtgcacatgatggctgccccccttga
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