Ictalurus furcatus (blue catfish): 128623883
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Entry
128623883 CDS
T09387
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128623883 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128623883 (rorcb)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128623883 (rorcb)
Nuclear receptors [BR:
ifu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128623883 (rorcb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128623883
NCBI-ProteinID:
XP_053506997
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Position
20:15492687..15529045
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AA seq
488 aa
AA seq
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MDRRLFWTWSWCENAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSR
QRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLAREPE
EAGEDSGLSRSYSSTGSSTSFSDLDDITTLPNGLLFDLPLTPGEAAEYCAFDLLEGGVSS
GTGSAASSSSSNQSSPEPSMLDIVETGRVKHEYQLLPEPSLLTHTLLGALSDDCSLLDIE
RITQNVVKSHIETCQYSTEELKRLTWNLYTPEETRSFQLKSAEWMWQQCAVHITNAIQYV
VEFAKRISGFMDLCQNDQIILLKAGCLEVLLIRMCRAYNSTNNTMFFNGKFASPQFFKAL
GCDDLVNAIFELAKSLCRLQLSEEEMALFSAAILLSPDRPWLTESQQVQKLQEKVYLALQ
HSLHMGGGSQEKLDKMASKLPQMKSICNLHIDKLEFFRLLHPETAFSFPPLYREVFGSEI
NFPDSTDS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggacagaagactgttttggacttggagctggtgcgagaatgctcaaatagaggtgatt
ccgtgtaagatctgtggtgacaagtcctctgggatccattatggtgtcatcacctgtgaa
ggctgcaagggattttttcggcgcagtcagcagaacaatgctatgtactcatgctctcgg
cagaggaactgcctgatcgaccgtacaaaccgcaaccgctgccagcactgtcgtctccag
aaatgcttggcactaggcatgagccgagatgcggtgaagtttggacgcatgtccaaaaag
cagcgtgacagcctgtacgcggaggtgcagcggcaccagcagctggcgcgcgagcctgag
gaggcgggcgaggacagcggactcagccgctcatacagcagcacaggttccagcacctcc
ttcagtgatctagacgacatcaccacgctgcccaacggcctgctctttgacctgccactc
acaccaggggaggcagctgaatactgtgccttcgacctgcttgagggcggggtcagtagt
ggaacagggagtgcagcgagcagcagctcatccaatcagagctctccagagcctagcatg
ctggatatagtggaaacaggccgagtgaagcacgagtaccagctgcttcctgagcccagc
ctgctcacgcataccctgctgggggcactatccgatgactgctctttgcttgatatagag
cggatcactcagaatgtggtgaagtcacatatagagacgtgtcagtacagcacagaggag
ctgaaacgactaacttggaacctatatacgcctgaggagacccgctccttccagctcaag
tctgctgagtggatgtggcagcagtgtgccgtgcacatcaccaacgccatccagtacgtg
gtggagtttgccaagcgcatcagcggcttcatggacctctgccagaatgaccagattatc
ctccttaaagcaggctgcttagaggttctgctgatccgcatgtgccgtgcgtacaactcc
accaacaacacgatgtttttcaacggcaaatttgccagccctcagttctttaaagcacta
ggctgtgatgacctggtgaatgccatctttgagttggccaagagcctgtgtcgcctgcag
ttgagtgaggaagagatggccctattcagtgccgccatcttgctatcacctgatcgcccg
tggttaacagagagtcagcaggtgcaaaagctgcaggagaaggtttatttggccctgcag
cacagcctgcacatggggggaggcagtcaggagaaactggacaagatggcgtccaagctg
ccgcagatgaagtcaatctgtaacctccacatcgataagctggagtttttccggctgctt
caccccgaaacggccttcagctttcctcctctctacagggaagtgttcggcagcgagatc
aacttccctgactccactgacagttag
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