Ictalurus furcatus (blue catfish): 128623987
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Entry
128623987 CDS
T09387
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128623987 (prdm1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128623987 (prdm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
STL11_N
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
128623987
NCBI-ProteinID:
XP_053507204
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Position
20:complement(3187972..3199885)
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AA seq
752 aa
AA seq
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MCGWNQSLSAASQHSSVMLTTEGSPNTADQVDLKMTVEDADMSNWTEAEFEEKCTYIVKD
HTWESADKTDLPRAQTSLPRNLAFRYAPDSKEVIGVVSREYIPTGTRFGPLVGESYTAEN
VPKDANRKYFWRIYAGGQFHHFVDGLDEEKSNWMRYVNPAHSQQEQNLAACQNGMSIYFY
TVKPIPADQELLVWYCTDFAHRLHYPPSGDLMMQKLKQSLIEAKQQVSEEKPVVKREHTV
SEILKDTWREPARPLPTRPHCTVSPDRPIYPHVIYPVRPQPHLREDIMKTSPSICFATCS
PALSSATPSPSARSSPETSPGNSPAPADPRDALPLYNGSLGHYPGYSLPNPLSSFYPNPH
YLFAPYSMGRTPPVGNVFSRMYPIYNSLLSPHMPHPPTMLPPEGGRHFLLPPHRDFLLPP
PKSAFSRATTPKDKPLHRHPHAPISGSPTAGSAVSVDQQPANPTSAQPSIRRSEDEAINL
SKMKRGPAGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCN
KGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFT
QFVHLKLHKRLHTRERPHKCTHCHRNYIHLCSLRLHLKGYCLAAMPSPHCSLDELNRINE
EIERFDISDNADRLEEIDGVDVERLVEKQIFSLICREMDLKASYHKGSTGGDLLPPSHPS
STYSLYEPSSETSVIKLLPVKVKQETVEAMES
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctggaaccaaagtctgtcggccgcctctcagcatagctccgtcatgttgacc
actgagggctccccgaacacagccgaccaggtggatctgaagatgaccgtcgaggatgcc
gacatgtccaattggacagaagctgagttcgaagagaagtgcacctacatagtgaaggac
cacacgtgggagagtgcggacaagacagatctgccccgtgcccagacctcgctgccgaga
aacctggcattcagatatgcccctgactccaaagaggtaatcggtgtcgtaagccgcgag
tacataccgacgggtacgcgcttcggccctctagtgggagaaagttacacagcagagaac
gtacccaaagacgccaacaggaagtacttctggaggatttatgcaggaggacagttccat
cattttgtagacggcctggacgaggagaagagcaactggatgcgctatgtgaatccagcc
cactcacagcaggagcagaacctggctgcttgtcagaatggcatgagcatctacttctac
acagtgaagcccatccctgctgaccaggagttgctggtgtggtactgcaccgacttcgca
caccgtctccactaccctccctcaggagatctcatgatgcagaagctcaagcagagtctg
atagaagcaaagcagcaggtgtcggaagaaaaacctgttgtgaagagagagcatactgtg
tcagaaatcctcaaagacacatggcgggagcctgcaaggccactgcccacacgtccccac
tgcactgttagccctgacagacccatctacccccatgtcatctacccagtccgcccgcag
cctcacctcagagaggatatcatgaaaaccagcccaagtatctgttttgccacttgttca
cctgcactgtcctcagccacccctagcccatcagcacgcagcagccctgaaaccagtcca
ggaaacagtcctgctccagcagatcctagggatgccctgccactctacaatggcagcctg
ggtcactatcctggctactccctgcccaaccccctttcctcattctaccccaacccacat
tatctctttgccccttactccatgggtagaacaccaccagtggggaatgtgttctcccgc
atgtaccccatttacaacagcttactgtcccctcacatgccccacccacccaccatgctt
ccacctgagggaggaaggcatttcctgctgccaccccacagggacttcctgcttccacca
cccaagagtgccttctctagagcgacgaccccaaaagacaaacccctgcacagacaccct
catgccccaatcagtggttctcccacagctggttctgcagtctctgttgatcagcagcct
gccaacccaacctcagcgcagccgagcatccgacgttcagaggatgaggcaatcaatctc
agcaagatgaagcgaggccctgcaggatacaagacgctgccatacccactgaagaaacag
aatggcaagataaagtacgagtgcaatgtatgcagcaagacttttggacagctgtcaaac
cttaaggtgcacctgcgtgtccacagtggcgagcgcccttttaagtgtcagacatgcaat
aagggcttcactcagttggcccacctgcagaagcattacctggtccatacaggagagaag
ccccatgaatgccaggtatgccacaagcgtttcagcagcacaagtaatctgaagacccat
ctaaggctgcactcaggtgagaagccttatcagtgtaagctctgcccagcgaagttcaca
cagtttgtccacctcaaactgcacaaacggctacacactcgagagcgcccccacaagtgt
acacactgccaccgcaactacatccacctctgcagcctgcgcctccaccttaagggctac
tgcctggctgctatgccttccccccactgcagcctcgacgaactgaaccgcattaatgag
gagattgagcgcttcgacatcagcgacaatgctgaccggttggaggagattgatggtgtt
gatgtggagaggctggtggaaaagcagatcttcagtctgatctgccgtgaaatggacctc
aaggcatcataccacaaaggcagcactggaggagatttgcttcctccatcacatccgtct
agcacctacagcctgtatgagccaagcagtgaaacatcagttatcaagctcctacctgtc
aaggtcaaacaagagactgtggaggcaatggaatcttag
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