Ictalurus furcatus (blue catfish): 128623994
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Entry
128623994 CDS
T09387
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128623994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128623994
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128623994
Spliceosome [BR:
ifu03041
]
Complex C
Other components
Complex C specific factors
128623994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
Toprim
Motif
Other DBs
NCBI-GeneID:
128623994
NCBI-ProteinID:
XP_053507223
LinkDB
All DBs
Position
2:complement(17425977..17442396)
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AA seq
614 aa
AA seq
DB search
MDTEAKPRKRNYTEEKSASEPSDDDDYVPYVPVKIRKQQLLQKMMRFRGKGLTEEDQKDS
GGEQKDEDEGLGPRSNVSLLDQHQYLKEKAEARKESAKEKQLKEEEKILESVAEGRALMS
VKEMAKGITYEDSIKTSWKAPRYILNMPIVRHDRVRKRYHILVEGDGIPPPIKSFREMKF
PQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEK
RLPFCKREGPYGLIICPSRELARQTHGVIEYYCKLLEDESAPQLRTALCIGGMSVKEQME
VVKHGVHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQ
RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECL
QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA
TDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCEESVLMDL
KALLVEAKQKVPPVLQVLQTGDEAMLDLEGERGCAFCGGLGHRITDCPKLEAMQTKQVTN
ISRRDCLANSSMDF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataccgaagccaaacccagaaagcgaaactacacagaggaaaagtccgcttcagag
ccttcagacgatgatgactatgtgccatatgttcctgttaagattagaaaacaacagttg
ttgcagaagatgatgcgtttccgaggcaagggtttgacagaggaggaccagaaggacagc
ggaggagaacagaaggatgaggacgagggtctcgggccacgctccaacgtcagcctgctc
gaccagcaccagtacctgaaggagaaagccgaggcccggaaggagtcagcaaaggaaaag
cagctgaaggaggaggagaagattctggagagtgtggctgagggccgagctttaatgtct
gtcaaggagatggcaaaaggtatcacctatgaagactctattaagaccagctggaaagct
cctcgttacatattgaacatgcccatagtgaggcatgaccgggtgaggaagcggtaccac
atcctggtggagggcgacggtatccctccgcccattaagagcttcagagagatgaagttt
cctcaagcaattctgaaaggtcttaagaagaaaggaattgtgcatccaacccccatccag
atccagggaatcccgactattctttctggcagagatatgattggcattgcgttcacgggc
tcagggaagactctggtgttcactctacccatcatcatgttctgtctggagcaggaaaaa
cgcctgcccttctgcaagagagaaggaccctacggactcatcatctgtccttctagggag
ctggcgaggcagacgcatggcgtcatcgagtactattgcaagctcctggaggatgagagt
gcgcctcagctgcgcactgccctctgcatcgggggcatgtccgtcaaagagcagatggag
gtggtcaagcacggcgtacacatgatggtggccacgccgggccgtctaatggacctgctc
aataagaagatggtgagtctggatatctgtcgatacctggcactggacgaggctgaccgg
atgatcgatatgggctttgaggaggacatcaggaccatcttctcttattttaagggtcag
agacagacgctgctcttcagcgccaccatgcccaagaagatccagaacttcgccaaaagc
gctctggtcaaacccgtcaccatcaacgtgggccgagccggtgctgccagcttggacgtc
attcaggaagtggagtatgtcaaagaggaagcaaaaatggtgtaccttctggagtgctta
cagaagacaccacctcccgtgttaatatttgctgagaagaaagcagacgtggacgccatc
catgagtatctgctcctcaaaggtgtggaggcagtggcgatccatggaggcaaagaccaa
gaggaaagaacaaaagccatcgaggccttcaaggagggaaagaaagatgttttggtggcc
actgatgtggcgtctaagggtttggatttccccgccattcagcatgtaattaactacgac
atgcctgaagagattgagaactatgtccatagaattggtagaacgggtcgatcgggcaaa
actggaatagccacaacgttcatcaacaagggatgtgaggaatcagtgctgatggatctg
aaggccttgctggtcgaagccaagcagaaagttccaccggttctgcaggtgctccagaca
ggggacgaagccatgctggatcttgaaggagagagaggctgtgcgttctgcggcggtttg
ggtcatcgtatcaccgattgtcccaagttggaggccatgcagaccaagcaggttaccaac
atcagccgcagggactgtctggccaacagctccatggacttctaa
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