Ictalurus furcatus (blue catfish): 128624085
Help
Entry
128624085 CDS
T09387
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128624085 (sbno2a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128624085 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128624085
NCBI-ProteinID:
XP_053507361
LinkDB
All DBs
Position
20:18843530..18871494
Genome browser
AA seq
1596 aa
AA seq
DB search
MPVLPTSVAMDTEDFLHPEGPQLESPKYSAPGPPLPNAIESQLFSSNPWPFPQQTQYNQY
SYPMQQSGRQFQVNPSSLDEFSSFPDVDFSVLTSGRNGDFAPDLSCMDDLSNPSLFSSTP
DSLSEYADPAGFGIDSLSHIASEGSAVTPMWDTPGHSQGQSTRFQDLHNQDEINALLSNQ
PLAAYKLPEIGQTPPEEEEEADEEETEELGHVDTYAEYKPSKSTIGISHPDIVVETSTLS
SVPPPDITYTLSIPDNTIRTGMLSALQLEAIIYACQQHEVILQNDQRAGFLIGDGAGVGK
GRTIAGIILENYLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVLALNKIKYGDTATS
EGVLFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAV
LDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAME
IVAMDMKVSGMYIARQLSFSGVSFRIEEIALDEEFKVVYNKAARLWAEALEVFTRAADML
GLVSRKSLWGQFWSSHQRFFKYLCIAAKVRRLVELAKAEMNQGKCIVIGLQSTGEARTRE
VLDENDGHLDRFVSAAEGVFQSLVQKHFPLEKPKREKTAGNKRKRKPRGRPPKFPKHCVE
VGGVIKISDGSDSDSEDMDSDSNSSPDSLQDNDDVIFVNHINGPTAKLEELKQKLLAKIA
ELGKELPLNTLDELIDQFGGPEKVSEMTGRKGRVVRRPDGRVQYESRAEQGFTIDHVNIK
EKERFMDGEKLVAIISEAASSGISLQADKRVQNKRRRVHMTLELPWSADRAIQQFGRTHR
SNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNVENKYGT
KALDKITKAILGYIENKVPPPKGYPGGESRFFADMKKGMIDVGIFCKEPRFGLNTEKDCT
ITKFLNRILGLEVHQQNFLFQYFTNNFEYLIDKDKKEGKYDMGILDLAPGNDEIHEEKQE
VFLTPGNPQEGQVILYKISVDRGMPWVEACSKADKLTGENEGFYLSHKLRGSQPCVLLAE
QGRGRNLIVYKPNIGRQAHPENLENLQQRYRKVTPEEAKDCWENQFVFSFKKCSHANWKG
KCKQLEQGQECWLGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQ
VGIKIPENCVERVRSELSQMDSEVKRARQQKEQRAQEQRVLQERLRLEQQKFLYSRKPFS
RPAMHLPNPPPYPSPRPGWAALPKSQAVDEVLDLTLSPCPSPEPKPTRANGVAARLKFPE
TFHLEELISQEQQRARRPPLHPNSLDTLQTIHTQKQQQHTVLSVLQQNRANPGHLLTPQQ
NSGQFNTQLLRHNGSKPDINTLTNHGIRVQQFQQHVNSVSRPPQLLQPSPIQQDAHQHSL
MHMHTHSLHTHVRENQMPVSEPAPLSLKLAQQGSLSNQSVTESSATPQDNFSFDLDLLSH
PAYSLTSKGPPSPSFSCPSPGTSSLFSSDPQSSSLSDSISPSSLFAPSSDRPLLPLPNGH
CSSDAQDVHKALMARGGPVDRRHSVIQFNPLDWDAT
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttctccccacatctgtcgccatggacaccgaggacttcctgcacccggagggc
cctcagctggagagccctaaatacagtgcgcccggtcctccactccccaatgccatcgag
agtcagctgttttcctctaacccgtggccatttccccagcagactcagtacaaccagtac
agctatcctatgcaacaatctgggaggcagttccaggtcaacccctcatctttggacgag
ttcagctcattccccgacgtggatttctccgtcctcacatcagggaggaatggagacttt
gcaccagatctgtcatgtatggatgacctgtccaatccgtctctgttctcctctacccct
gactctctgtctgaatatgctgaccctgctggctttggcatcgatagcctgtcccacata
gccagcgagggctctgctgtgacaccaatgtgggacacacctggacacagccagggacag
tcgaccaggtttcaagatttacataatcaggacgaaatcaatgccctcttgagcaaccaa
ccattagcagcatataagctccctgaaatcggtcagactccaccagaggaggaagaggag
gcagatgaggaagagacagaagaactcggacacgtagacacctacgccgaatacaagcca
tccaaatctactataggaatttctcatccagacattgtggtagagaccagcactctctcc
agtgtccctcccccagacatcacctacacactctccatcccagacaacactatccggacc
ggcatgctctctgccctgcagctcgaagccatcatctatgcctgccagcaacacgaggtc
atcctgcagaacgaccagagggcaggttttctgattggggatggagccggcgtggggaag
ggtcgcaccatagctggcatcatactggagaactacttaaaaggaaggaagcgagccctg
tggttcagtgtttctaacgatctgaagtatgacgcagaacgagacctcaaggacatcgac
gccccgaatattcctgtgctcgctttaaacaagattaagtatggagacacagctacctca
gagggtgtcctgtttgccacgtactcagcgctgatcggggagagtcaggcaggaggacag
caccgcacacgactcaaacagatattggactggtgtaaacctggctttgatggagttatt
gtgtttgacgaatgccataaagccaaaaatgcgacgtccacgaagatgggcaaagctgtc
ctggacctacagaacaagctgccccgggccagggtggtgtatgctagtgccacaggtgcc
tctgagccaaagaacatgatctatatgagccgtttggggatttggggagagggaacaccc
ttcaggacatttgaggacttcctacatgccattgagaaaaggggtgtcggcgccatggag
atagttgccatggatatgaaagtcagcggcatgtacatagcccggcagctcagcttttcc
ggcgtgtcgtttcggattgaggaaatcgcactggacgaagagttcaaggtggtctacaac
aaggcagctcgactgtgggctgaagcgctggaagtgttcaccagggcagcggatatgctg
ggattggtctctcgtaagtccctctggggccagttttggtcctcccaccagcgcttcttt
aaatacctctgcatcgccgccaaagtgcgccgcctggtggagctcgctaaggctgagatg
aatcagggcaagtgcattgtgatcgggcttcagtcaaccggcgaagcccgcactcgtgag
gttctggatgagaatgatggacatctagaccgattcgtctctgcagctgagggtgtgttc
cagtctctggttcagaagcactttccattagagaaaccgaagagagaaaagactgctgga
aataaacgaaaacgaaaaccgagaggtcggccacccaaatttccgaaacactgtgtagag
gtaggcggagttattaagatcagcgacggctcggattcagactctgaggacatggacagt
gactcaaactcgtcccctgactcactgcaagacaacgatgacgtcatctttgttaaccac
atcaatggacctactgcaaaactggaggaattgaagcagaagctgctggctaagatagca
gagctgggaaaggagcttcctcttaacacactggacgagctgatcgatcaattcggaggc
ccagagaaagtgtccgagatgacgggtcgtaagggccgagtggtgcggcggcccgacggc
agggtgcagtatgaatcacgtgctgaacaaggattcaccatcgaccacgtgaacatcaaa
gagaaagaacgctttatggacggtgaaaagctggtggcgatcatctccgaggctgcaagt
tcagggatttctctacaggcagataaacgtgtgcagaataaaaggagaagggtgcacatg
actctggagctgccatggagtgctgaccgcgccatacaacaattcggccgcactcatcgc
tctaaccaggtaacagctccagagtacatcttcctgatctccgagttagcgggagagaga
cgctttgcttccatcgtggccaagcgcctggagagtttgggtgcgctgacacacggcgat
agacgagccaccgagtccagagatctgagcaaatacaacgttgaaaacaaatatggcaca
aaagctttggataagatcactaaagccatcctgggatacattgaaaacaaagttccacca
ccaaaaggctatccagggggtgaatcaagattctttgcagatatgaagaaagggatgatc
gacgtcggcattttctgtaaggagccacgctttggcctcaacacagagaaagattgcacc
atcactaaattcctgaatcggattttgggcctggaggtgcaccagcagaactttctcttc
cagtacttcaccaacaactttgaatacctgattgacaaggacaaaaaggaaggcaaatat
gacatgggtatacttgatctggctccaggtaatgatgagatccatgaagagaaacaggaa
gtgttcctgactcctgggaatccccaagaaggccaggtcatcctgtataagatcagcgtg
gatcgggggatgccgtgggtcgaggcctgcagcaaagcagacaaactgactggggaaaat
gagggcttctacctttcccacaagctgcgagggagccagccgtgtgtgctgctggcagag
caaggtcgaggacgtaatctcatcgtctataagcctaacatcggcagacaagcccaccct
gaaaacctggagaatctgcaacagcggtaccgcaaggtgaccccagaagaggccaaagat
tgctgggagaatcagtttgtcttctcgttcaagaagtgcagccatgccaactggaaaggt
aagtgtaagcagttggagcagggtcaggagtgctggctgggcatgcgtctgcggcagtac
cacatgctgtgcggagctttgctgagagtgtggaagcgagtcgcagatgtcgtctctgac
atcaccaactccagcatcctgcagattgtgcgcctcaaaaccaaacagaatagcaagcaa
gtcggtataaagataccagagaactgtgttgagcgtgtgcgtagcgagctctctcagatg
gactctgaggtgaagcgagctcggcagcagaaggagcagcgcgcgcaggaacagcgcgtc
ctccaggagcgtctcaggctcgagcagcagaagttcctctacagccgcaagcccttcagt
cgccctgctatgcatctaccaaacccccctccgtacccaagcccacggccaggctgggct
gctctgcccaagagccaagctgtggacgaagtgctggacctcacactcagcccctgcccg
tcccctgagcccaaacccactcgtgcgaacggtgtagcagcgaggctgaagttcccggag
acgtttcacctggaagagctgatctcgcaggagcagcagagggcgaggcgaccgccctta
catcccaacagcttagacacactgcaaaccatacacacacagaagcagcagcagcacacg
gtgctgagcgtgttgcagcaaaacagggcgaacccaggacatttgctcacgccgcagcag
aactccggtcaattcaacacgcagctgctgagacacaacgggagcaaaccggacattaac
acgctaaccaaccacggcatacgcgtgcaacagtttcagcagcatgtaaactctgtatca
cggccacctcagttgcttcagccctcccctatacagcaggacgctcatcaacactcactg
atgcacatgcacacacacagtttgcatacgcatgtacgggaaaaccaaatgccagtcagc
gaacctgctccactttcactaaaactggctcagcagggctctctcagcaatcagtcggtc
acggaaagttctgcgactccgcaggacaacttcagtttcgacctcgacctgctcagtcat
cctgcatactcgttaacctctaaaggccctccctccccttcgttttcttgtccttcccct
gggacgtcatcgctcttctcttcagacccccagtcgtcttccctctcggactccatctcc
ccttcttctctgtttgcgccttcgtccgaccgaccgcttcttccgttacccaacggccac
tgcagctcagacgcccaggatgtccacaaggccctaatggctcgcggaggtcctgtagac
cgccgccactccgtcattcagttcaatcctctagactgggacgccacctag
DBGET
integrated database retrieval system
