Ictalurus furcatus (blue catfish): 128624103
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Entry
128624103 CDS
T09387
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128624103 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128624103 (prpf38b)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128624103 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
128624103 (prpf38b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
128624103
NCBI-ProteinID:
XP_053507402
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All DBs
Position
20:complement(10320585..10353897)
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AA seq
464 aa
AA seq
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MAGNPQQQAVSKPSSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHEV
VDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQV
MGLITHTDSPYIRALGFMYIRYTQPPADLIEWFEPFLDDEEELDVKAGGGCVMTIGEMLR
SFLTKLEWFSTLFPRIPVPVQKSIDQQMKNRPRKPPQKESKEDEEDADWHRSRSPRRTPS
PLRSPNRSRSRSRHRERRGASFDRELERERDRQRKDRDRERDRVADRDRDRERDRRHSRT
PDRASEWRRSREQRNERKEREKEQDGESERERSRRKERKHKERTSGGERERERSKEKRAK
GEGDDRRHKDEREERKQREERKCKRSSQSRSRERRHKGERSSRKCSRSRSRSRQEPEEKE
KSRKRECSHSKEHMHKRSHSREHSHRRDARNGKDHTRMDIDGTP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatccgcagcagcaggccgtgagcaaaccttcttcagggaaacacggcaac
gttttacctctgtggggaaatgagaagacaatgaacttaaaccctatgattctcacaaat
gtgttatcgtctccatatttcaaggttcagttatatgagctgaagacctatcatgaggtt
gtggacgagatctacttcaaggttacccatgtggagccctgggagaaaggcagcagaaaa
acagcagggcagactggaatgtgcggaggggtgcgaggtgtaggcacaggtggtatcgta
tcaacagctttctgtctactgtacaaactgttcacactaaaactgacccgaaaacaggtg
atgggtctcattacacacacggactccccgtacattcgagcacttggcttcatgtatata
cgatacacacaaccccctgcagacctgattgagtggtttgagcccttcctagatgatgag
gaggagctggacgtgaaggctggcggtgggtgtgtgatgactatcggtgagatgttgcgt
tccttcctcacaaagcttgaatggttttctacactgtttccacgcatcccagtgcctgtc
cagaagtccatcgaccagcagatgaaaaaccgaccacgaaaaccaccacagaaagaaagc
aaagaggatgaggaggatgcagactggcaccgctcaaggtccccgaggagaacaccgagc
cctctgagatcccccaaccgctcacgcagccgcagtcgccaccgagaacggcgtggagcc
agctttgaccgcgagcttgagagagagagggaccgccagcgcaaagatagagacagggaa
agggacagggttgcagacagggacagagatcgagagagggatcgtcggcattcccgaacc
ccagatcgagcctcagagtggaggaggagccgtgaacagaggaatgagagaaaagagagg
gagaaagagcaggatggggagagtgaaagggagcgaagccgtcggaaggaacggaagcac
aaagagcgcaccagtggtggagagcgagaaagggagcgctcaaaagaaaagagagccaaa
ggagaaggagatgaccggcgtcacaaggatgagcgagaagagagaaaacaaagggaggag
cgcaagtgcaagcggtctagccaaagcaggagtagagagaggaggcacaaaggtgagcgc
tctagcaggaaatgttctcggtcacgctccaggagtcgtcaggaaccagaggagaaggag
aagagtaggaagcgcgagtgcagccacagcaaggagcatatgcacaaacgcagtcacagc
cgagaacacagtcaccgcagagatgcccgaaacgggaaagaccatacgagaatggacatt
gacgggactccttga
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