Ictalurus furcatus (blue catfish): 128624119
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Entry
128624119 CDS
T09387
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128624119 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128624119 (rpap2)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
128624119 (rpap2)
Protein phosphatases and associated proteins [BR:
ifu01009
]
HAD phosphatases
Fcp/Scp phosphatases
128624119 (rpap2)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128624119 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
DUF3720
Motif
Other DBs
NCBI-GeneID:
128624119
NCBI-ProteinID:
XP_053507443
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All DBs
Position
20:22003964..22018576
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AA seq
604 aa
AA seq
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MEGAEKKRARASKTKQGGRASRVREAQVRAAEEADRRKEVLKESLREKLELERRALQVVE
RLLDDNVTEDFLTDCARLITPANYRDAVEERFITKTCGYPVCSNKLANVPSQRYKISTKT
NKVYDISERKCFCSNFCYKASKYLEVQISKSPLWLRKEERPPEVKLLKKGDGGTSGLEVK
LSDRPVSKSDVENLIPECTGSHGVSGESESECSDEEQGFVSSVVARQQQQRRVHWGDLPR
RDGENQTHDADTDVTGVRRERVKRGDDAKLSEPISDSVSVDETSERLQQVALPDSPAPDE
NSPETSLDISQVGMSKKTAIGLRNLLKSHGKARADAPDVTLSLLEGLTRTLMEWRTNETM
RFLYGPDYTSHSEAELQSDEEEEELDEDDLEDVEKVKGSEGGGGGGAAQARPSAAAPDYE
TLRTETEMLELRVLEFYRGVCVLPEEVQTEAVEEKARTEEREKVPPLPPVDSRAQRAIQR
GIAVEKLGRSLRDVLGPLGVTMNEIIDDLNGIVRTFRFTNVNIIHKPPEWTLIAVVLLSV
LTEVSPSLRESMTRTRSVEYISSLMKELRLKDEDLQSLVKLFKPDRKAHATRRSAAESSR
VTPP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgccgagaagaaacgagctcgcgcgtcgaaaactaagcaaggtgggagagca
tctcgggtgagagaagctcaggtgagggcagctgaagaggcggacagaaggaaggaggtt
ttgaaggagtctctgagggagaagctggagttggagcggagagctcttcaggtggtggaa
aggctcctggacgacaacgtgacggaggatttcttgaccgattgcgctcgactgatcaca
ccagcaaactacagagatgcagtggaggagcgctttatcaccaaaacgtgtggctatcct
gtctgctccaacaaactcgctaacgttccgagtcaacggtataaaatttccaccaagacc
aataaggtgtatgatatcagtgagcgtaagtgcttctgtagtaatttctgctacaaagcc
tcgaaatacctcgaagtccagatttccaaatcaccgctgtggctgagaaaggaggagaga
cctcctgaggtgaagctgttgaagaagggggacggaggcacgtcaggtctggaagtgaag
ctatcagacagacctgtgagtaaatcagacgtcgagaatctgatcccggaatgcaccggg
tcgcacggagtctccggtgagagcgagagcgagtgtagcgatgaggagcagggcttcgtg
tccagcgtggtggccagacagcagcagcagaggcgtgttcactggggggatctgcccaga
cgggacggggaaaaccaaacacacgacgctgacaccgacgtgacgggcgtgaggcgcgag
agagtaaagcgcggtgatgacgctaagctctctgaaccaatcagtgactcggtgtcagtg
gatgaaaccagtgagcgtctacagcaggtcgctctcccggactctccagctccggatgaa
aactctcccgaaacgagcctcgacatctcccaagttgggatgagtaaaaaaactgctatc
ggactccgaaacctgctgaagagccacgggaaagcgcgagccgacgctccagacgtcacg
ctcagcctgctggaaggtctcacacgcacgctgatggagtggagaaccaacgagaccatg
aggttcctctacggaccagattacacctcgcactccgaggccgagctgcagagtgatgag
gaggaggaagagctggacgaagatgacctggaggatgtggagaaggtgaagggttcagaa
ggaggaggaggaggaggagcagctcaagctcgaccctctgcagcagcacctgattacgag
actctgagaacggagacggagatgctggagctccgagtgctcgagttttacagaggagtg
tgtgtcctgcccgaggaggtgcagacggaagctgtggaggagaaagcacgcaccgaggag
agagagaaggtcccgccgctgccgccggtggactctcgggctcagcgggcgatccagagg
ggcatcgctgtggagaagctcggcagaagtttgagagacgtcctcgggcctctgggcgtc
accatgaacgagatcatcgacgatcttaacggcatcgtccggaccttcagatttacaaac
gttaacatcatccacaagcctcctgaatggaccctgatcgccgtcgttttgctttcagtg
ttaaccgaagtgtctccgtcgctgagggagtcgatgacgaggacgcgctcggtcgagtac
atcagctctctcatgaaggagctcagactgaaggacgaggatctgcagagcctcgtgaag
ctcttcaagcctgacagaaaagcgcacgctacacgccgctcggctgcagagtcgagccga
gtaacaccgccgtaa
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