Ictalurus furcatus (blue catfish): 128624410
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Entry
128624410 CDS
T09387
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128624410 (trim59)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128624410 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
Med2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
128624410
NCBI-ProteinID:
XP_053508020
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All DBs
Position
20:4905560..4911875
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AA seq
422 aa
AA seq
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MENLEEDLTCSVCYSLFNDPRVLPCSHTFCKACLENVLQVSTNFSIWRPLRLPLKCPNCR
SMVELPPNGVEALPINVCLRAIIEKYQHDNEPRAPSCPEHHRQPLNVYCVQDCKLICGLC
LTIGQHQGHTIDDLQTAYVKERNTPARLLERLTDGRWEEVCGLVEKLEQEKSRHEGLIRK
DREAVTQFFQGLERLLEHKKEAFMKVLDRANGQLACAYKPLIEKLKDLKEEQLELVSIVS
SISEDESALVFLEKVNHLRERVDALTQAELPEVPTLHISPCLEEFLEEHWVNVTIGRLED
GPIPKISCHVKRHCDKEPQSELAQKRTFKSWTIVAFLTVLLFLLLFWLNPVSGESLGFSN
LSHITQAVVSLAHELTLLLHDSGTFLYCLLHDLNLKFSAYISAVGERTYQRVAFFLKTLQ
LC
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttggaggaggacttgacgtgctcggtttgttattccctctttaacgatcca
cgagtactaccctgctcccacaccttctgcaaagcatgtctggagaacgtgctccaggtc
tccactaatttctccatctggcgcccgcttcgcctaccactgaagtgtcccaactgccgt
agcatggtggaacttccccctaatggcgtggaagctctgccgattaatgtctgtctgcgc
gccatcatagaaaagtaccagcatgacaatgagccgcgagctccttcctgccccgagcac
catcgccagcctctgaacgtctactgcgttcaggactgcaagcttatatgcggcttgtgc
ctcactatcgggcagcatcagggccacaccattgatgatctgcagacagcgtacgtcaaa
gagcgcaatacccctgccagactgctcgagcggctcacggacgggcgctgggaagaagtc
tgtggcctggtggagaagttagaacaggaaaaatctcgacatgaaggtctaataaggaaa
gaccgtgaagctgttacgcagttctttcagggcctggagcgccttcttgagcacaagaaa
gaggcattcatgaaagttctggacagggccaacgggcagctggcctgcgcttataagcca
cttatcgagaagcttaaggatcttaaggaggagcagctagagctcgtctctatcgtctca
agcatcagtgaagacgagtcagcccttgttttcctggagaaggtgaaccacttgagggag
agggttgatgccttgacccaggcagagctgcctgaagtccccaccctccacatctcaccc
tgtttagaggagttcctcgaggaacactgggttaacgtgacgattggaaggctggaagat
ggtcccattccaaaaatctcctgtcacgtgaagagacattgtgacaaagagccacagtca
gaattagctcagaagcggacgttcaagtcttggaccatcgtggcttttctaacggtgctg
ctgttccttctgcttttctggttaaatccagtgagtggagaatcacttggattctctaat
ctctcacacattactcaagcagtagtgagtctagctcatgaactaactttattacttcat
gattcggggacatttctgtactgcctgcttcatgatcttaaccttaaattcagtgcgtat
atttcagctgtcggggagcgcacctatcaacgtgtggccttctttttaaaaacattacag
ttatgctaa
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