Ictalurus furcatus (blue catfish): 128624738
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Entry
128624738 CDS
T09387
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128624738 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128624738 (cdh4)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Major cadherins
128624738 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cytomega_TRL10
DUF4690
Motif
Other DBs
NCBI-GeneID:
128624738
NCBI-ProteinID:
XP_053508393
LinkDB
All DBs
Position
21:15631611..16086679
Genome browser
AA seq
1048 aa
AA seq
DB search
MKVGFVLPLACALALKSSLDTAGSLTVDPCRLGFSQNFYTVFIPQERLQGHTVVKGTMLS
SGQVKFEACHTNERISFESSDPKFGVRPDGSVYAERDVMHLSEPVRFVVTAQGSKDMPSW
KTIIKLVITRHPRPPLINQGNAGGPTVDPCRPGFSQNFYTVFIPREQLQGQSIVKGTLLS
SARVKFEACHLNERISFESSDPKFGVRPDGSLYAEQDVMNLSEPIQFMVTAQGSKDTQIW
ETTVKLAIAGHPLPPLINQIGDETGYHSRSHHSHYSNPRVIMFPRRHQRGSSTNGLRRQK
RDWVIPPINVPENSRGPFPQMLVRIRSDQDKEIEIRYSITGAGADQPPSDVYIIDPITGK
MSVTKPLDREDRASYHLRAHAVDVNGNQMEPPIDLYIYVIDMNDNRPEFQNQVYNGSVPE
VSKPGTSVMRVTAIDADDSTMPNGLVHYRILNQSPHIPIPNMFTINGATGEISTIAAGLD
REKVSQYTLIVQATDMEGSLNFGLSNTATALITVTDINDNPPELDAKTFLGEVPENAVGV
VVANLTVRDRDQPHTPNWNAVYRIVGGDSMGHFTIRTDELTNDGRVTVVKPVDYERNGAF
MLTVVVSNQAHLASGIPSSLSSTAGVTISVLDVNEAPVFPSNPKVIRFEEGVPADTTLTI
FAAQDPDRFIQQTVRYSKLSDPGNWLRINRTNGQIMTTAILDRESPYVKNNVYEASFLAV
DNGSPPATGTGTLQIYLIDVNDNVPVLVPRESQLCERSRPSSRINITASDADVEPNAGPY
VFELPSFPPSVRRNWTISRLNGEYAQLRLRIPYLEAGVYRVPILVSDSGNPPLTNRSIIR
VKVCPCDEHGDCTSLGAVASASLGTGAIIAILICIIILLSMVLFFVVWMKRREKERQAKP
LLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPETLEHIMSKPGGVRRVDERPVIPE
SQYPIRPSIPHPEDIGEFITDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLDSSS
SEEQDYDYLNDWGPRFKKLADLYGGGDD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcggcttcgttcttcctctggcgtgcgctttagccctgaaaagctcactggac
actgctggaagtctgactgtggatccatgtagactcggattctcccagaacttctacact
gtgtttatcccacaggaacggctgcagggtcacaccgttgtcaaaggcaccatgctgtca
tcaggtcaagtgaagttcgaggcttgtcatacgaacgagcggatcagcttcgagagcagt
gaccccaaattcggcgtccgtccggacggctctgtgtacgccgagcgagacgtgatgcac
ctgtccgagcctgtacggttcgtggtgacggctcagggaagcaaagacatgccgagctgg
aagacgattattaaactggtaatcaccagacacccacgtcctcccctcataaaccagggg
aatgctggaggcccgacggtggatccatgcagacccggattctcccagaacttctacacc
gtctttatcccacgggagcagctgcagggccagagcattgtcaaaggcaccctgctgtcg
tctgctcgagtgaagttcgaggcttgtcatctgaacgagcggatcagcttcgagagcagc
gaccccaaattcggcgtccgtccagacggatctctgtacgcagagcaagacgtgatgaac
ctgtccgagcctatccagttcatggtgacggctcaggggagcaaagacacgcagatttgg
gagacgacggttaaactggccatcgccggacacccacttcctccactcataaaccagatt
ggtgatgaaactggttaccactcaagatcccaccacagtcactactccaatcccagagtc
atcatgttcccacgtcgacaccaacgaggctcctccaccaatgggctgcgccgtcagaag
agagactgggtcattcctcccatcaatgtgcccgagaactctagaggaccctttccacaa
atgctcgtcaggatccgctcggaccaggataaagagattgaaatccggtacagcataacg
ggagccggtgctgatcagccacccagtgatgtctacatcatagaccccatcaccgggaaa
atgtccgtcaccaagccgctggacagagaagaccgagcctcctaccatctgagagctcat
gcagtggacgttaacggaaatcagatggagcctccgattgatctgtacatttacgtcatc
gatatgaatgacaacagacctgagtttcagaaccaggtctataatggatcggttcccgag
gtctccaaaccaggcacgtcagtgatgcgcgtgactgcgatcgacgctgacgacagcacg
atgcccaatggcctggtgcactacaggatcctgaaccagagtccacacatccccattccc
aacatgtttaccatcaacggagctacaggcgagatcagcaccatcgcagcaggcctggac
agagagaaagtgtctcagtacacgctgatcgtgcaggccacagacatggagggcagcctg
aacttcggcctctccaacacggcgacggctctcatcaccgtcaccgacatcaacgacaac
cctccagagctcgacgccaaaacgttcctaggcgaggtgccggagaatgcagtgggtgta
gtggtggccaacctgaccgtgcgagacagagaccagcctcacacacccaactggaacgca
gtttacaggatagtgggcggagactccatgggtcacttcaccatccgcactgatgaactc
accaatgatggcagagtcacagtagtcaagccagtggactatgaaaggaatggcgccttc
atgttgaccgtggtggtatctaatcaggcccatctggccagtggcatcccgtcgtctctc
tcgtccacggcgggcgtcaccatctcggtactggatgtgaacgaggctcccgtcttcccc
tccaaccccaaagtaatccgttttgaggagggagttcctgccgataccacgctcaccata
ttcgctgctcaggatccagaccgctttattcaacagactgtcaggtactctaagctgtcc
gatcctggaaactggctccgaatcaacaggacaaatggccagatcatgacgacagccata
ctggaccgggaatcgccttacgtgaaaaataacgtgtatgaagcgagttttctggctgta
gataacgggtctcctcctgcgacaggaacaggcactctgcagatctatctgatagatgta
aatgataatgtaccagtgctggtgcccagagagtcccagctgtgcgagaggtcacggccc
agctccaggatcaacatcacggcttcggatgctgatgtcgagcccaatgccggtccatat
gtcttcgagctaccctcgttccctccctctgttcgccgcaactggaccatctcacgtctg
aatggtgaatacgctcagctcaggctgagaattccatacctggaagcaggtgtgtatcgt
gtgcccatcctggtctcagactcaggcaaccctcccttaacaaaccgctccatcatcagg
gtgaaggtgtgtccctgtgatgagcatggagattgtacttcacttggagcagtggcatct
gcaagcctgggcacgggcgccatcatcgccatcctcatctgtatcattatcctgctcagc
atggtgctgttttttgtggtgtggatgaagcgcagagagaaggagcgccaggccaaacct
cttctcattgacccggaggatgacgttagggacaacatattgaaatatgatgaggaggga
ggaggagaggaagatcaggactatgacctgagccagctgcagcagccagagactcttgag
cacatcatgagcaagccagggggagtgaggagagttgacgagaggccagtcatcccggag
tcccagtacccaatacggcccagcatacctcatcctgaagacattggagagtttatcact
gatgggctgcgagcagcggataatgacccgacggctccaccatacgactctctactcgtg
tttgattatgagggcagtggctcgacagctggctcggtcagctcgctcgactcttccagt
tcagaagagcaagactatgactacctcaacgactgggggccgcgctttaaaaaactggcc
gacctctacggcggtggggacgactga
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