Ictalurus furcatus (blue catfish): 128624748
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Entry
128624748 CDS
T09387
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128624748 (rrp9)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
90S particles
Other 90S particles
128624748 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR19_1st
WDR54
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
WD40_CFAP43
DUF5836
Ntox15
Motif
Other DBs
NCBI-GeneID:
128624748
NCBI-ProteinID:
XP_053508413
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All DBs
Position
21:19272089..19280951
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AA seq
480 aa
AA seq
DB search
MSFFIKKKSASMAAGKGEKSAAGKRKADNQGGKGRPQKLNKRQSEEISSESENENDDAQV
RKQKEVEGDEEIEETPQEKKLRLAKLYLEQLREEEEKKAEDEEFESDLIAGRLQEDVLEQ
KGKLQRLIAEELIAPDPAEIRLLRGHKLSVTCLVITPDEKHIFSASKDCSIIKWEVESGR
KVQKIAGGRKGTEERHVGHTGHVLCMAISSDGKYLATGDTNKLIMIWEAATCKHLYRFTG
HRDAVSGLAFRRGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDCLGRERCVT
AGGRDRTLRVWKIAEETQLVFNGHESSIDCIQLINEEHMVSGGDDGCVSVWSVNRKKPLT
TVKRAHGLHGDAGLEGPYWVSSVAALHNSDTVASGASGSHNGSVQLWKCGPGFRGLEPLF
SIPLNGFVNSLKFSNTGKFLVAGVGQEHRLGRWWRMKEAKNGLYIIPLRRQNKETMTTEQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttataaagaagaaatccgcctcaatggctgccgggaaaggcgaaaagtct
gctgctggcaagcggaaggctgataatcagggtggaaaagggcgtccacaaaagctcaat
aaacgccagagtgaggaaatctccagcgaatcagaaaatgaaaacgatgacgcgcaggtt
cgaaagcagaaggaggtggagggggacgaggagatcgaggagacgccgcaggagaagaag
ctgcgtctggctaagctttacctggagcagctgagagaagaagaggagaagaaggcggaa
gacgaggagtttgaatcagacctgatagccggacgcctgcaggaggacgtgctggagcag
aaaggcaaactgcagagactcatcgctgaagagctcatagcgccggatcctgccgaaatc
cgcttgctgagaggacacaagctctccgtcacgtgtctggtcatcaccccggacgagaaa
cacatcttctccgcgtctaaagactgttccatcatcaagtgggaggtggagagcgggagg
aaggtgcagaagatcgcaggagggaggaaggggacggaggaacggcacgtgggtcacacg
ggacacgtcctctgcatggctatttcctctgatggcaaatacctggccacaggagacacg
aacaagctgatcatgatctgggaagctgctacgtgtaagcacctgtacaggttcacggga
cacagagacgccgtatcggggttggcgttcaggagaggaacacatgacctgtacagcgcc
tctcacgatcgctcagtcaaagtgtggaacgtggatgagaacgcttatgtagaaactcta
tttgggcatcaggacgcgatcacgggcttggactgcctcggacgggagaggtgtgtgacc
gcagggggccgcgatcgaacgctccgagtgtggaagatcgccgaggagacgcagctggtc
ttcaacgggcacgagagctccatcgactgcatccagctcataaacgaagagcacatggtt
tcaggcggcgatgacggctgcgtgtccgtctggtccgtgaacagaaagaagccgctgact
actgtgaagcgggcacacggtctccatggcgacgccgggctggaagggccgtattgggtg
tcctccgttgcagcgttgcacaactccgacaccgtagcctcaggtgcctcaggctcccat
aatggctctgtgcagctgtggaagtgcgggccgggattccgaggcctggagccgctcttc
agcatcccactgaatggttttgtgaatagtttgaaattctccaacacgggcaagttcctg
gtggccggcgttggacaggagcacagacttggccgatggtggaggatgaaggaggctaag
aacggactttacatcattcctctcagaagacagaacaaagagactatgacgactgagcaa
taa
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