Ictalurus furcatus (blue catfish): 128624904
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Entry
128624904 CDS
T09387
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128624904 (traip)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128624904 (traip)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128624904 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
Crescentin
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_Vps41
HIP1_clath_bdg
MAD
zf-RING_16
Zn_ribbon_8
zf_RING_Vps8
KxDL
zf-RING-like
Sec3_CC
Gp58
COG3_N
KASH_CCD
Vps52_CC
CALCOCO1
FANCL_C
EF-hand_like
zf-Nse
WEMBL
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
128624904
NCBI-ProteinID:
XP_053508727
LinkDB
All DBs
Position
21:19846575..19853108
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AA seq
454 aa
AA seq
DB search
MPIRAYCTICSDYFDHSRDVAAIHCGHTFHYACLLQWFQSAPTKTCPQCRKQVSTRHIIN
KLFFDVAPDEEGSAADPESLQNELDRMKVVLCEKERDWRDKQKAAEALKETIEKQRADLD
RVRREIGEKEMLCTTLRKQMQYLESQQRESEAAKEEAKRLRVKMKTYESLDMVLQGQRAE
VEAMISDMGVGQSAVEQLSIYCISLKKEYDSLKVCLRTSNEMCEKLKREVFCSNNKLQKV
TLEMNRAKEDMKAFQNDLANSDKEITSLKKKVEILQKTLSTPTRTNEAISRLVFESPAPI
ELKSPRLHRPSDSQDIDLNMTFDISTPEQVEKKPAAVPSKKMRLDQAATSSKHCENTFGS
KISHPKDDEVSMEPMFRNSLLFRKKMFGSMLDPHSKPGAVRTGYDGLGGRTKFIQPSPLA
EIRPLVMKAKRKKVSRPAPSKLTPNLATLDGFLE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgggcgtactgcaccatctgctcggattactttgaccattccagagatgta
gcagcgatccactgtggtcacacgttccactacgcctgtcttctacagtggttccagtca
gctcccactaagacctgtccccagtgcaggaagcaggtcagcaccagacacatcatcaac
aagctgttcttcgatgtagcgccggacgaagagggatctgcagccgaccccgagagcctg
cagaacgagttggaccgaatgaaagtagttttatgtgaaaaagagagagactggagagac
aaacagaaagcggccgaggctctgaaggagacgatcgagaagcagagagccgacctggac
agagtgaggagggagatcggagagaaggagatgctctgtaccaccctgagaaagcagatg
cagtatttggagagtcagcagagagaaagcgaggcagctaaagaggaggccaagaggctg
cgggtcaaaatgaaaacctacgaaagcctggacatggtactgcagggtcagagggcagag
gtggaggccatgatctcggacatgggcgtgggacagtcggctgtggagcagctctccatc
tactgcatctctctcaaaaaagagtacgacagtctgaaagtctgcctccggacctccaac
gagatgtgcgagaagctgaagagggaagtgttctgctctaataacaagttgcagaaagtc
acgctagagatgaaccgagcgaaggaggacatgaaggcttttcagaatgacctcgccaac
tcggataaagagatcacgagtctaaagaagaaagtggagatcctgcagaagaccctgagc
actcccacacgcaccaacgaggccatcagccgcctcgtgttcgagagccccgcccccatc
gaactcaagtccccacgcctgcaccggccctcagacagccaggacatcgacctcaacatg
acctttgacatcagcacacctgagcaggtggagaagaagcccgcggccgtcccctcgaag
aagatgcgcctggatcaggcagcgacgtcgtccaaacactgcgagaacacgttcgggagt
aagatctcacaccctaaagatgacgaggtttccatggagcccatgttcaggaactctctg
cttttcaggaagaagatgttcggcagcatgctcgacccgcacagcaaacctggagctgta
agaacgggctacgatggactcggaggaaggaccaaattcatccagccctctccgctggct
gagatccggccgctcgtcatgaaggcaaagaggaagaaagtgtcgaggccagcgccgagc
aaactgacccctaacctcgccacactggacggattcctggagtga
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