Ictalurus furcatus (blue catfish): 128624931
Help
Entry
128624931 CDS
T09387
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128624931 (chd5)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128624931 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
AAA_22
Motif
Other DBs
NCBI-GeneID:
128624931
NCBI-ProteinID:
XP_053508786
LinkDB
All DBs
Position
21:complement(8840312..8893715)
Genome browser
AA seq
1997 aa
AA seq
DB search
MPGSLSNEEEGQDDLDFEDDVPDEDEETEHVRVPLSPLERFFSDDDSIKQKKKKPSKQKE
GRMPKVKKKKKEGCSSEHEAVSDREDQRSGSESSSYGMLKKKKKKPREKKEKKGKWRKKD
DDDDDDDDDGNMKEPKSSSQLMEEWGLEDVQYAFSEDDYKTITNYKAFSQFLRPLIAKKN
PKIPMSKMMTVLGAKWREFSANNPFKGSSATAVAAAVAAAVETVNITPSISISSVQQLSP
MGQVKKAKTKEGKGPSARKKSKQPKDTKKKAKAKKPKLKAGQSSKRKKASSSEDDFLDDF
SDFDDISIHSASVRSDASGVPKKKTRRGRKKRKREDGDGYETDHQDYCEVCQQGGEIILC
DTCPRAYHLVCLEPELEKAPEGRWSCPHCEKEGIQWEAKDDDEEEEDPAGEEEDDHMEFC
RVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKILHWMWGD
PPLPPEPLSTQDGKKEDIPVKPPLKGRPERLLFVKWAGLSYWHCSWVSELQLELYHTVMY
RNYQRKNDMDEPPPFDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGIKPEWLIIHRILN
HSFDKDGDVHYLIKWRDLPYDQCTWEIDDFDIPEYESFKQAYWDHREQMLGEDHRPLVVR
KGKSLKEEVKRRDAPPETPVVDPTVKFEQQPWYIDATGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPEFYVVT
YTGDKDSRAVIRENEFTFEDSAVKSGRKVFRMKKDTPVKFHVLLTSYELITIDQAILGSI
TWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLL
VKSSGKLTLLQKMLKKLKDDGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEE
LFKDDVEAIGDSKDGEEGSVIHYDDNAISKLLDRSQDATEDTEIQNMNEYLSSFKVAQYV
VREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDT
SQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVG
GNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLKGKSEKEFRAYVSLFMRHLC
EPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDMIPAGLEL
KKLTESLSSDPNTPVPASPAPTQPSTPVPSDKPESGPVPPEDKDSTEHESSKTAESEQSC
LPSQTSKESECYPDKTSESEELKRGGAEQKSNEESEKKDDSPAESEPSANQTQPISKQNE
QSANQTPPIGQQSKDIENTAEKMEKDASAAVKLEDKEPKQGYKAAPHEPKSEDAIESQLN
GEKEARDEVDDGQKDEKNGAKARFMFNIADGGFTELHTLWQNEERVAVSSGKMYDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMNKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDSTHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPSMLSRIPPVSARLHMSERSILSRLTNREPQPQQPFPQGAF
ACSSMYSNSFGGGFRGPAGAAMVNYSQMPLGPYVSVSSNGPPAPSSHMDKKSSEVLRDVS
PSDLKSSKPSDVICIED
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctgagcaacgaggaagagggccaagacgatttggattttgaagacgac
gtgccagacgaggatgaggagaccgaacacgtccgcgtgccgctctcgcctctggagcgc
ttcttctcagacgacgactcgatcaagcagaagaagaagaaacccagcaagcagaaggag
ggcaggatgcctaaagtgaaaaagaagaagaaggagggttgctccagcgagcacgaggct
gtatcggacagggaggaccagcgctccgggagcgagagcagcagctacggcatgctgaag
aagaaaaagaagaagcccagagaaaagaaggagaagaagggcaaatggaggaagaaggac
gacgatgacgacgacgacgacgacgatggaaatatgaaggaacccaaatcttcgagtcag
ctaatggaggagtggggtctcgaggacgtccagtacgccttctccgaggacgattacaaa
accataaccaactacaaggccttcagccagttcctcaggcctctcatcgccaagaaaaac
cccaagatcccgatgtccaagatgatgacagtgttaggcgctaaatggcgcgaattcagt
gccaacaacccgtttaaaggcagttcggcgacggctgtagccgctgcagtggctgccgcc
gtggaaacagtcaacatcacgccttcgatctccatcagcagcgttcagcagctctctcca
atggggcaggtcaaaaaagccaaaaccaaagagggcaaggggccgagcgcaaggaagaag
agcaagcagccaaaggacacgaaaaagaaagcaaaagccaagaagcccaaattgaaagca
ggccagagcagcaagaggaaaaaagcctcctctagcgaagacgatttcttagacgacttc
tccgacttcgatgacatcagcatccacagtgcctccgttcgctccgacgcctcgggggtg
cccaagaagaaaacgagacgaggacgcaaaaagaggaaaagagaagacggagacggctac
gagacggaccatcaggactattgtgaggtgtgtcagcagggcggtgagatcattctgtgt
gacacctgcccccgagcctatcaccttgtgtgtctcgagcctgagctggagaaggccccc
gagggtagatggagctgccctcactgtgagaaggagggaattcagtgggaagcaaaggac
gatgacgaggaggaagaggaccctgcaggagaggaagaggacgaccacatggagttctgt
cgagtgtgtaaagacggcggagagctgctatgctgtgacacgtgtccttcctcctaccac
atccactgcctgaacccgcctctgcccgagatacccaacggagagtggctgtgcccacgg
tgcatgtgcccccctcttaaagggaaagtccagaagattctgcactggatgtggggggat
ccgcctttaccccccgagcctctctccactcaggatggtaaaaaggaggacataccggtc
aaacctccgctaaagggtcgtcccgagaggctgctgttcgtgaagtgggcggggctgtcc
tactggcactgttcctgggtcagcgagctacagttggagctctatcacacggtcatgtac
aggaattaccagcggaagaacgacatggacgagccgccacccttcgactacggctcgggt
gaagaggagcttaacaacgagaagaggaagagcaaagacccacagtatgccgctatggag
gagcgtttctatcgctatgggatcaaacccgaatggctaatcatccaccggatcctcaat
cacagttttgacaaagacggagacgttcactacctgatcaaatggagagatttaccgtac
gaccagtgcacctgggagatcgacgacttcgacatccccgaatatgagagttttaaacag
gcctactgggaccaccgggagcaaatgctaggtgaagaccatcgtcccctagtggtgaga
aaaggaaagagcctgaaagaggaagtgaagaggagagatgctcctcctgaaactccggtt
gtggaccccacagttaaatttgagcagcagccgtggtacatcgatgctacaggaggaact
ctgcacccgtaccagctggagggtctgaactggttgcgtttctcctgggcacagggaacc
gataccatcctggctgatgagatgggactgggcaagacggtgcagacgatagtgttcctg
tactcgctctataaagagggtcactctaaaggcccgttcctggtcagcgctccattgtcc
accatcattaactgggagcgagaatttgagatgtgggctccggaattttacgtggtgaca
tacacgggcgataaagacagccgggcggtgatacgggagaacgagttcacgttcgaggac
agcgctgtcaaatcaggccgcaaagttttccgcatgaagaaagacacacctgtgaagttc
catgtgctgttgacctcgtatgaattgatcaccatcgatcaggccattctgggctccatc
acttgggcatgtttggtcgtggatgaagcccatagactgaagaataaccagtctaagttt
ttcagaattctgaatggctataagatttactacaagctgctcctgaccggtacgcctcta
cagaacaatctggaagagttattccacctgctgaacttcctcactccagagcgcttcaat
aatctggagggatttctcgaggagtttgctgacatttctaaagaagatcagattaagaag
ctgcatgacctgttgggacctcacatgctgcggaggctgaaggccgatgtcttcaagaac
atgccagcaaaaaccgagctaattgtgcgcgtggagctcagccctatgcagaaaaaatac
tacaagttcatcctcacgcgaaactttgaagctctgaactctaaaggaggcggaaaccag
gtttcacttctcaacatcatgatggacctgaagaaatgctgcaaccacccgtacctgttc
cctgtggcggctgtggaggcccctgtgttaccaaacgggtcctacgatgggaacctgctg
gtgaagtcctcagggaaactcactctgcttcagaaaatgctcaagaagctcaaagacgac
ggacatcgcgtccttattttctcccagatgacgaagatgctggacctgttagaagacttc
ctggagttcgaaggctataaatacgagcgtatcgatggtgggataactggaggactgcgg
caggaggccattgatcgcttcaatgcaccgggagcgcagcagttctgtttcctgctgtcc
actcgtgctgggggattgggaatcaatctggcaaccgctgatactgtcatcatctacgac
tctgactggaacccacataatgacattcaggcgttcagccgagcacatcgtattggacag
aataagaaagtgatgatctatcgctttgtgacacgggcatcagtggaggagcggattacc
caggtggccaagcgcaagatgatgctcacacatctggtggtgcgtccgggcctgggctcc
aaaacaggatccatgtccaagcaggagctggatgacatcctgaagttcggcacagaggag
ctctttaaagacgacgtggaagccatcggtgacagtaaggacggagaggaaggcagtgtg
atccactacgatgacaacgccatctccaagctgctggaccgcagtcaggatgccaccgag
gacactgagatccagaacatgaacgagtacctcagctccttcaaggtggctcagtatgtg
gtgcgggaggaggatggagaggaggaggtgcagagggagatcattaaacaggaggagaat
gtggatcctgactactgggagaaactcctgcggcatcattacgagcagcagcaggaggat
ctggcacgcaatctggggaagggcaagcgcatccgcaagcaggtcaactacaacgacacg
tctcaggaggaccaagaatggcaggacgatctttcagacaatcagtccgaatactcagtc
ggatctgaggatgaggatgaagatttcgaggagagacctgaagggggacggcgacagtct
cgcaggcagctgaagagcgaccgggacaaaccgctgcctccactgctggctagagtagga
ggaaacatagaggtacttggttttaatgcgcgtcagcgaaaggccttcctgaacgccatc
atgcgctggggtatgcctcctcaagacgccttcaactcgcactggctggtccgagacctg
aaggggaaaagcgaaaaagagttccgagcgtacgtgtcgctgttcatgagacacctgtgc
gagcctggagcagacggagcggagacgtttgcggacggcgtgccgagggagggcctgtcc
cgacaacacgtcctcacccggattggagtcatgtctctcgtgaggaaaaaggtgcaggag
tttgagcatgtgaatggcaaatacagcactccagatatgattcctgcaggtctggagctg
aaaaagctcacagagagtctctcttcagacccaaacactcctgtaccagccagtcctgct
ccgactcagcccagcaccccggtaccgtcagacaaacctgagagcggtcccgttcccccg
gaagataaagacagcactgaacacgagagctcgaaaacggccgagtctgagcaatcctgt
ctgccttctcagacatccaaagaatccgaatgttatcctgacaagacgagtgagagtgaa
gaactgaaaagaggtggcgctgagcagaagtcaaacgaagagagcgagaagaaagacgac
tcacccgccgaatcggagccctcggccaatcaaacgcagccaatatctaagcagaacgag
cagtccgccaatcagacgccacctataggacaacaaagtaaagatatagagaacacagct
gagaaaatggaaaaagacgcttctgctgccgtgaagttggaggacaaagaaccaaaacaa
ggttacaaagctgctccccatgaacccaaatctgaggacgccattgagagtcagctgaat
ggagagaaagaagcgagggacgaggtggacgatggccaaaaagacgaaaagaatggcgct
aaggcacgcttcatgttcaacatcgcagatggcggctttacagagctgcacactctgtgg
cagaatgaagaacgtgtcgctgtgtcgtccggtaagatgtatgacatctggcaccggcgc
catgactactggcttttggccggcatcgtaactcacggctatgcccgctggcaggacatc
cagaacgacccacgctatgccatcctcaacgagcccttcaagactgagatgaacaaaggc
aactacctggagatgaagaacaagttcctggcacggaggttcaagctgttggagcaggcc
ctggtgattgaagagcagttaaggcgggcagcttacctgaacatgacgcaggactccaca
cacccagccatggcgcttaacacgcgtttcgccgaggtcgagtgtctggctgagtcgcac
cagcacctttccaaagagtctctggctggaaataagccggcgaatgccgtcctacacaaa
gtgctgaatcaactggaagaactgctgagcgatatgaaagcggacgtgacgaggctgccg
tccatgctctcccgcatccctcctgtatccgctcgactccacatgtctgagagaagcatc
ctgagccgtctcaccaaccgtgagcctcaaccccagcagccttttccacagggagctttt
gcctgttcttcaatgtacagtaacagtttcggaggaggatttcgaggtcctgctggagct
gccatggttaactacagccagatgcccctggggccgtacgttagtgtgtcctcgaacggt
cctccagcacccagcagccacatggacaagaaatccagtgaggttttgagagacgtgtct
ccatctgacctcaaatccagcaaaccctcagacgtcatttgcatcgaggactag
DBGET
integrated database retrieval system
