Ictalurus furcatus (blue catfish): 128624955
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Entry
128624955 CDS
T09387
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
ifu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128624955 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128624955 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128624955 (srsf6b)
Spliceosome [BR:
ifu03041
]
Common components
Common spliceosomal components
SR proteins
128624955 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
128624955
NCBI-ProteinID:
XP_053508850
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All DBs
Position
21:complement(9349045..9353811)
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AA seq
355 aa
AA seq
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MPRVYVGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVVVEHARGPRRDRDGYGGGHWGSGRSSSGYSSRSRSGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTDINGRKIR
LVEDKPKRRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSRSRSRSHSKRRSHSRSKRK
SHSKSPAKSRSKKSRSRSRSRKSRSRSASRKSRSKSHSKPRSERGSRSRSKEKSVSKKSR
SRSASPMENGDKKSVSRSPSPHEDRRRSKSPTKRSPSRSPSRSKSRSRSRSASQD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtatacgtaggcaggctgagttatcatgtccgcgaaaaggacatccagagg
ttcttcagcggctacggaaagctgttggagattgatttgaaaaacgggtacggtttcgtg
gagtttgaggacacccgtgatgctgatgatgccgtgtacgaactgaacggaaaggagctg
tgtggcgagcgcgtggttgttgagcatgccaggggcccccgtcgggaccgggacggatat
ggtgggggtcattggggttctgggcgcagtagtagtggttacagcagcaggagccgctcc
ggcagagacaaatacggaccgcccgttcgcacagagtaccggctcatcgtggagaatttg
tccagtcgatgcagctggcaggacctaaaggactttatgcggcaggccggtgaggtgacc
tatgccgacgcccacaaggaacgaacgaacgaaggcgtgatcgagttccgttcctactcg
gatatgaagagagccctggacaagctggacggcaccgacatcaacgggaggaaaatccgt
ctggtggaggataaacccaaacgacgccgctcgtactctggcagccggtccaggtcccga
agcagacgccgctctcgcagcagaagccgtaggagcaggagctcacgaagccgctcaagg
tctcgctctcgctctcgatcccacagcaagcgccgctcccactccagatccaagagaaag
tcccactcaaagtctccggctaaatcccgttccaagaagtcccgctctcgttcccgctcc
cgcaagtcccgcagccgttctgcgagccgcaagtcacgttccaagagccactcaaagccc
cgatccgagcgcggctcccgcagccgctccaaggagaagtcggtgagcaagaaatcgcgc
agccgctcggcctcgcccatggagaatggagacaagaaatctgtctcgcgttctccttct
ccgcatgaggatcgccgccgttccaaatcgcccacaaaacggtcgccatctcgctctcct
tctcggtccaaatcccgctcacgctcccgatctgcctcgcaggactga
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