Ictalurus furcatus (blue catfish): 128624958
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Entry
128624958 CDS
T09387
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128624958 (rbm39a)
Spliceosome [BR:
ifu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128624958 (rbm39a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RBD_DEAH11
RSRP
RRM_7
Motif
Other DBs
NCBI-GeneID:
128624958
NCBI-ProteinID:
XP_053508854
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All DBs
Position
21:complement(12550562..12556814)
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AA seq
529 aa
AA seq
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MADDFDIEAMLEAPYKKDETKSISSNGHEERSKKKKKSRSRSRSRERKRSKSRDRKRSRS
REKSRERKRSRSRDKRRSRSRERKRSRSRSRERGARFRTAFSGLKFNGGSRGKTGPLPII
KLSRRKSRSRSPFRRDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGK
VRDVRMISDRNSRRSKGIAYIEFVDATSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAAM
ANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITF
ADAECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQ
LMARLAEGTGMQIPPAAQQALQMSNSMVAMAAATAAMNPGLSFNINVPTNQPLNLPSQPI
ATHCFQLSNMFDPNSENEPGWDVEIQDDVIEECNKHGGVIHIYVDKKSTEGNVYVKCPSI
PAAMAAVSALHGRWFGGKMIKAAYVPLPTYHNLFPESVQATQLLMPTRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgactttgacatcgaagccatgcttgaggcgccctataaaaaggatgagacc
aagtccataagttccaatgggcatgaagaacggagcaagaagaaaaagaagagcagaagt
cgtagtaggagcagggagagaaagagaagcaagagccgggaccgcaaaaggagccggagc
cgggagaagagtcgtgaacgaaagaggagccggagccgggacaagagacgcagtcggagc
cgagagaggaaacgcagtcgttccaggagcagggagcgtggcgctcgcttcagaacagcc
ttttctggcctgaaatttaatggtggttccagggggaagactggcccactgcctatcatc
aaactaagccgaagaaagtctagaagccgtagcccattcagacgagacaaaagtcccatc
agacagcctatagataacctcacaccagaggagagggatgcccgcacggttttttgcatg
caacttgctgccagaatccggccccgggacctggaagaattcttctctgctgtgggaaaa
gtgagggatgtgaggatgatctctgacagaaactccagaaggtccaagggtatagcctac
attgaatttgtggacgccacctctgtaccgctagcaattggtctgtctgggcaaaggctg
cttggagtaccaatcattgttcaggcttcacaggctgaaaagaacagagctgctgcaatg
gccaacaacctacagaaaggcagtgctggacctatgaggctgtatgttggctcactgcat
ttcaacatcacagaggacatgctcagagggatctttgaaccatttggacggattgatagt
attcagcttatgatggatagtgaaacagggcgatccaagggatatggttttatcacattt
gctgatgctgagtgtgcgaagaaagccttggaacagctaaatggctttgaactggctggc
aggccaatgaaagtgggtcatgtgactgagcgcactgatgcctctacagccagctcgttt
ctggataacgatgaactggaaaggactggcattgacctgggcaccactgggaggctgcag
ctaatggccaggctggccgaagggactggtatgcagatccctccagctgcacagcaggct
cttcagatgagcaactcaatggtggcaatggcagcagctacagcggctatgaatcctgga
ttgagtttcaacatcaacgtgcccacaaatcaacctctcaatctaccatctcagccaatt
gccacacattgcttccagctgtccaacatgtttgatccaaattcggagaatgaacctgga
tgggatgttgaaatccaagatgatgtaattgaagaatgtaacaaacatggtggagtaatt
catatatatgtggacaagaaatctactgagggaaatgtatatgtgaagtgcccaagcatc
cctgctgcaatggctgctgttagtgcattacatggacgctggtttggaggtaaaatgatc
aaagctgcatatgtccctctgccaacataccacaatcttttccctgagtcggtgcaagct
acacaacttcttatgcctactcgccggtga
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