Ictalurus furcatus (blue catfish): 128624983
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Entry
128624983 CDS
T09387
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128624983 (ap5b1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128624983 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
128624983
NCBI-ProteinID:
XP_053508915
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Position
21:10933329..10939315
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AA seq
934 aa
AA seq
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MASWNQRIPSFLLSPTQFLSCTTSETFLAELLDKLRDDKANDSKKILLLSVLLEHPTVLC
PTTSAGEETAQELVSILNFTPQKFISLKCHLVLAIANVLICTSCLANQSKVAEDYLNFLF
TSIQDTNDNAGGPALHAVRGTACECLREMETCQPGLLSQKLEVLYHLKQQETTVLHQSYC
TLYMQALRNAIQILTQQKDVDNAKFRSVLAGNEGFAWQSAKLAKSTLSVSMAQVPQLPTT
LDFKELKSIMSLLLEESYLMTSPAQAALLRGLVEMVAMVPGISPAVFKSQLLRLFGTTNV
ELMHATLFMKGTFTDSLFTAEDEHFLLKRLVGMAKHPLLRIPEKLFYMDCILHFPENRPI
SSSGEECLPVLITPQLTLSLFPTVFNDSTTMLCRLNFLCLVHLEANEEEDGQGLGYLVDY
VMALLRIVDNHGSREMVVTSFRAIFIFLLHFNHMENLSEKLVHRLRELYSRNCHLAPNLI
NLTDRIQERFEDSLWSVWLLKALQRCIVGMPPSQLTLQSLAWHLKILARVAQESQIAQRS
TICFLLDILVNSNLCERRSWHVGAAILAVCRNLLQHPTLNQMFIELADLLQHMSGHYEDT
DIQDHARFYYTLLTNLSWEKHAGILAKVPVGGQVKVRSLSAITASEELGSCLTVLQTDSC
VLQLIKADKNDSQDVVPSTEVLTEKNLYEVYQEQLKTPGFASAVTLTYSLTHVNATDPRF
DRLFTICLHFDVDTSHYVNVNDIYVPCLFRDRKPHQVSVTLKPFHPYPTSLRVSAIFTTE
DRQSWHTHLPDVKVSFHEIFLPVPLPPGTSLQRKEDVFDRIWDSVTSGEPSASETSLFCF
KTGSNTLADLIEKNFQGYVIAQELNRWKILFYLPPLFHVLLAIREGEDAVQVSIATDNWE
LLPHVNSYLQNITAHRNATADEESRTRTGIRVEF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctggaatcaaagaattccctcttttttattgagtccgactcagtttttgtcc
tgcaccacttctgagacctttttagctgaacttcttgacaaactgagggatgacaaagca
aatgacagtaagaagattctccttctgtctgtattactggagcatcccaccgtcctttgc
ccaaccacgtcagcaggagaggagacggcgcaggagcttgtgtcgattctcaactttacg
ccacagaaattcatcagtctaaagtgccacctcgtgctggctatcgccaacgttttgata
tgcacgtcgtgcttggccaaccaatcgaaagtcgccgaggactatttgaactttctgttc
acatcgattcaggacacgaacgataacgcaggtggtccggctctccacgccgtccgaggc
acagcttgtgagtgtcttcgagaaatggagacctgccaaccaggccttctgtcacaaaag
ttagaggttctttatcaccttaagcagcaggaaaccaccgttctgcatcagtcatactgc
acgctctatatgcaggcgctcaggaatgcgatccagattttgacccaacaaaaagacgtg
gataacgctaagtttaggagcgtcttagccggaaacgaaggctttgcatggcaatctgcc
aagcttgcaaagtccacgttgtctgtcagcatggcgcaagtcccccagctcccgacgaca
ctggatttcaaagagctgaagtccataatgtccttgctcttggaggaatcctacttgatg
acgtctcccgctcaggcggccttgctccgaggacttgtggagatggtggcgatggtacca
ggcatctctccggccgtattcaagtctcagttgctcaggctttttggaacaaccaacgtg
gagctgatgcacgccacattgtttatgaaaggcacgttcaccgatagcctcttcaccgca
gaagacgaacatttcttgctcaagcgtcttgtaggaatggcgaaacacccccttttgagg
attcctgagaagctcttttacatggactgcattcttcactttcccgagaacagaccgatc
tctagcagcggagaggagtgcttgcctgtcctcatcacgcctcagcttacgctgtccctc
ttccctactgtgttcaacgacagcaccacaatgctttgtagactaaactttctctgcctg
gtacacctcgaggcaaacgaggaagaggatggccaaggtctggggtatctggtcgattac
gtgatggctctgctcagaatagtagacaatcatggcagcagggaaatggtggtgacatct
ttcagagcgattttcattttcctcctgcacttcaaccacatggagaacctctcggagaaa
ctcgtccaccggttacgcgagctgtattccaggaactgccaccttgcgccaaatctgatc
aacctcacagatcgaatccaggagcgcttcgaggattcgctttggtcggtctggttgttg
aaagcacttcaaaggtgcattgtgggaatgcctccttcgcaacttacccttcagagtttg
gcttggcatcttaaaatcttggctcgagtggcacaggagagtcagattgcccagaggagt
accatctgcttccttcttgacatcctggtcaattccaacctttgcgaaaggaggagctgg
cacgtcggcgccgccattctcgcggtatgccgcaacttgctccagcaccctactctgaac
cagatgttcattgaactggcggatctcctccagcacatgtccggacactacgaggacacg
gacattcaagaccacgctcggttctactacacccttcttaccaacttgtcctgggaaaaa
catgccggaatccttgccaaagtccccgtcggaggacaggtgaaagtccgatcgttgtca
gccattactgcaagcgaagaacttggcagttgtttgacggttcttcagactgacagttgt
gtgcttcagcttataaaagctgacaaaaatgactctcaggatgtagtcccaagtacagaa
gtcctgactgagaagaacttgtatgaggtttaccaagagcaactcaaaaccccgggcttt
gcctcagcggtcactctgacgtacagcctgactcacgtgaacgccacggatcctagattc
gatcgactcttcacgatatgcctgcattttgatgttgacacgtcgcactacgtgaacgtg
aatgacatctacgtgccgtgccttttcagagaccggaagccgcatcaagtcagcgtgacg
ctgaagccgtttcacccatacccgacgagtttacgagtgagcgccattttcaccacggaa
gacagacagtcttggcacactcatctccctgacgttaaagtgtcgttccatgaaatattt
ctccccgtgcctttaccgccaggcacgtcgcttcagcgcaaggaggacgtgtttgatcgg
atttgggactccgtaacgtcaggagaacctagcgcttcagagacgagcttgttctgtttt
aagactggaagcaacactctagcggatctgatcgagaagaatttccagggttacgtgatt
gcgcaagaactaaataggtggaagatcctgttttaccttccacctctttttcatgtttta
ttggcgatcagagagggtgaggacgctgttcaagtcagtattgcgacagacaactgggaa
ctgctgcctcatgtcaactcctacttacaaaacataacggcgcatcgtaacgcgacagcc
gacgaggagtcaaggacccgtaccgggatacgagttgaattttaa
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