Ictalurus furcatus (blue catfish): 128625085
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Entry
128625085 CDS
T09387
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128625085 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128625085 (abca3b)
Transporters [BR:
ifu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128625085 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_15
RsgA_GTPase
AAA_23
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
128625085
NCBI-ProteinID:
XP_053509123
LinkDB
All DBs
Position
2:21425330..21475690
Genome browser
AA seq
1710 aa
AA seq
DB search
MAVWRQFGLLLWKNYLQQKRQILVTLVEITLPLLFSAILIVLRQKVSFTNYPNATHYDSF
SLEQPPDKLPTGLQLAYVPANSSIVRQVAEDVQLSLEHGTISAVRGFETEHQFEEFVKTD
PESAKILAAVVFEHLFTQDDEPLPLQVSYHLRFTYNPRNAPPKEKSELNPNNDLDWHTLG
LFPLVQLPGPREQHDSYGGTPGYYREGFLMVQHAVDRAIMKAYNRTAATALFMQTRVVLS
RFPYPAYIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAIVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFIFLSISIFFVTLLFCVQVSPNGAVLTYSDPTLVFVFLLVFAVATISFCFM
ISSFFSRANVAAAASGFLYFFSYLPYLFMWPRYDLLSHAQKVSVCLISNVAMAMGAQLIG
MFEGKGMGIQWSNLFEPVTVDDDFSLAQVLGLLLLDSILYSLVAWYIEAVFPGEYGMPRP
WYFFILPSYWCNSPRFALLKEKEEEEDAEKALKGEFIEEEPTGLISGVKIKHLAKVFKMG
NKTKEAVKDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMV
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPREKIPDEVDRIIRILKLEDKRSARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRSRTILLTTHF
MDEADLLGDRIAIMADGELQCCGSPLFLKNKYGAGYHMVIVKDVLCNVSEISRLVHMYVP
NATLESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTVDDTSSISGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVAQTLPGQHKTPELPL
ALNRYGPTTVPMALDSNAGPLATALAEAYAAQLAAQSARPVTNLTDFSEYVLNNAMMEGG
AFNERCVVGAAFRGRTTRFAEITGYFNNQGYHTPATALMLVDNALYRLLAGPSASIQTGN
NPMPRNVSETAQSQFSEGQTGFAIAINLMYGMASLASTFALLLVIERAVKSRHVQRVSGV
YLSNFWFSALLWDLINFALPCLLMLVVFRAFGVKAFVEENHMVDVLLLLLLYGWAVIPLM
YLLSFLFSSAATAYTRLTIFNIISGTATFLAVTIMTIPELQLQNLSRLLDKVFLLFPNYC
LGMSFSQFYRNYETISFCTTSFLTKDICHLYNITYQLNYFSMNEPGVGCYLVAMSLQGVV
FLVLLFVIELQCINTLFSLCRRCKKGMLIGEEALQPEDRDVADERKRVLECQPVVESMVG
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTAG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVFACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIHME
ADLEEMDLQHFKDFIESIFPGSVLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYSIE
DYCVSQISLEQVFLSFAQFQHCSEGQRKSH
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtggcgacagtttggcctacttctctggaagaactacctacagcaaaagcgt
cagatcttggtgacgttggtggagatcacactgcccctcctgttctctgccatcctgatt
gtactgcgtcagaaggtgtcctttaccaactaccccaatgccacgcattacgatagtttc
tcactggaacagcctcctgataagttgcccacaggcctgcaactcgcctacgtgccggca
aattccagcatagtacgccaggtggctgaggatgtgcagctcagtctggaacatggcacc
atcagtgctgtgcgtgggtttgagactgagcatcagtttgaggagtttgtgaagacagac
cctgaatcagcaaagatcctggcagcagtggtgtttgagcacttgtttactcaagatgat
gaacctctcccacttcaggtcagttatcacctgcgcttcacctataacccccgaaatgct
cctcccaaggaaaaatcagagctgaatccaaacaatgaccttgactggcacactctcggc
ctgttccccctcgttcagttgcctggaccgcgagagcagcacgattcttatgggggcact
ccaggttattaccgtgagggcttcctaatggttcagcatgctgtggatcgagccatcatg
aaggcctacaacaggacagcagcgactgccctcttcatgcagacacgggtcgtgctgtca
cgcttcccttacccggcttacatctatgatgtcttcatcctggccatccagaaccagctg
cccctcttgctggtgctcagcttcacctacacttccctcaatatcgtccgcgccatagtg
caggagaaggaaagaaaactcaaggaatacatgagaatgatgggtctgagcaactggctg
cactggagtgcctggttcctcatgttcttcattttcctctccatctctatcttctttgtc
accttgctcttctgtgtccaggtgagtccaaatggagcagtgctgacctatagtgaccct
acactagtcttcgtcttcctcctcgtttttgcggtggctactatcagcttctgtttcatg
atcagctccttcttctccagagctaatgttgcagcagcagcaagtggtttcctgtacttc
tttagttacctgccatacctcttcatgtggccacgttatgacctgctatcccacgctcag
aaggtttctgtctgtcttatctccaatgtagcgatggctatgggtgcccaacttattggc
atgtttgaaggcaaaggtatggggatccagtggagtaatctgtttgagcctgtgactgtg
gatgatgacttctcactggctcaggttcttgggctcttgctgctggactccatactctac
agcctggtggcttggtacatagaggctgtcttccctggcgagtatggaatgccacgaccg
tggtactttttcatactgccctcatactggtgcaacagccctcgatttgccctgctgaaa
gagaaggaggaagaagaggatgcagagaaagcgctgaaaggcgagttcattgaagaagag
ccgacaggattaatctctggggtcaaaatcaagcacctggccaaggtttttaaaatgggc
aataagactaaagaagcagtgaaggatctcacattaaacatgtatgaaggccagatcacg
gtgctgctaggacacaacggagccggaaagaccaccacactgtctatgctgactggtttg
tttcctcccagcagtggccgagcttacatcaatggctacgatatatgccaggatatggtt
ctgatccgccgcagcctaggcctgtgtccacaacacgatgtgctttttgacaacctcaca
gtcagagagcatctgcttttctatgcccagctgaagggttaccctcgtgaaaagattcca
gacgaggtggaccgcatcatccgtatcctaaaactggaggataagaggagtgcacggtca
aagaccctttcaggtggaatgaagcgcaagctttcaatcggaattgcacttattggagac
tcgaaggtggtgatgctggacgagcctacctctggcatggacccatcagccaggcgagcc
acatgggatcttttgcagggcgagaaacgaagtcgcaccatccttctcaccacgcacttc
atggacgaggcggacctactgggagaccgcattgctattatggctgatggggaactccaa
tgctgtggctcacctctcttcctcaagaacaaatacggtgctggctaccacatggtgata
gtaaaagatgtgttgtgtaatgtatcagagatcagccgcctggtccacatgtacgtgccc
aatgccaccctggagagtagcgctggggctgaactttcctacatcctgccaaaagagagc
accagccggttcgagcttctgtttgctgaactggaaatgaacagagaggagttgggcatc
gcaagctatggagcatctgttaccaccatggaggaagttttccttagggtcgggaagctg
gtggactccagtctagacattcaggccattcagcttccagccctgcagtaccagcatgag
cgaaggtcacatgactggacggttgacgatactagcagtatcagcggcatgactgatgtg
actgacttcaccgatagtggcacactgatctcagaggactgctccaacatcaaactcaac
acaggggctaagctgtatatgcagcagttctacgccatgttcctgaagagggcactgtat
agctggcggaactggaaggtgatggtggcacagtttttagtgccacttatcttcacagta
gtcgcgcttgtggtggctcagactctccctgggcagcacaaaaccccagaacttccccta
gcactcaaccgctatggccccaccactgtgcccatggccctggattctaatgctggaccc
ctggctacagcgcttgctgaagcctatgctgcccagcttgctgcccagagcgccagacca
gtgaccaacctaactgacttctctgagtatgtactgaacaatgccatgatggaaggagga
gccttcaacgagcgctgcgtggtgggtgctgcttttcgtggccgaactacgaggtttgct
gaaatcactggctacttcaacaaccaaggctaccacacaccggctactgcgctcatgctg
gtggataatgcactgtacaggctcctggctggccccagcgcttccatccagacaggaaac
aatcccatgccccgtaacgtgtcagagacagcccagagccagttctcagagggtcagact
ggctttgccatagccattaacctaatgtatggaatggcatccttggccagtaccttcgcc
ctgctcctggtgattgagcgcgctgtgaagtccaggcacgtacagcgggtcagcggagtc
tacctctccaacttctggttctctgcattgctctgggatctgatcaactttgcactgcct
tgtcttctaatgctggttgtgttccgtgcgtttggggtgaaggcctttgttgaggaaaat
cacatggtagatgtgctgcttttgttgctgctctatggctgggctgtgattccactaatg
tacctgctcagcttcctgttctctagtgctgccactgcttacacacgcctcaccatcttc
aacatcatcagtggcacagccaccttccttgccgtcaccatcatgaccatccctgagctg
cagctgcagaatctttcacgtttactggataaagtattcctgctattccccaactactgc
ctgggcatgtcctttagccagttctaccgaaactacgagaccattagcttctgtaccacc
agcttcctcacaaaagacatctgccatctttacaacatcacctatcagctgaactacttc
tctatgaatgaacccggagtgggctgctacttggtggccatgtccctgcaaggtgtggtt
ttcctcgtccttcttttcgtcatcgagctccagtgcatcaatacgctcttcagcctctgc
cggagatgcaagaagggtatgctgatcggagaagaagcccttcaacctgaggatagagac
gtggccgatgagagaaagagggttttggaatgccagcctgtggtggagtccatggtgggc
agtcctcttattctgcaagaacttaccaaggtgtacccagggagtcagtctctgctggca
gtggaccgcttgtccctggctgtggggaaaggtgaatgctttggcctgctaggttttaat
ggagctggaaagacaactacatttaaaatgctgactggagatgagactgtgactgcaggg
gatgccttcatcgatggctacagtattcttcgcgatgtgaagaaggtacagcagcgaatc
ggctactgtcctcagtttgatgctgtgctggatcacatgactggccgtgagactcttagc
atgtatgcaaggctcagaggaatccctgagaaatatgtgtttgcatgtgtggagaatgtg
ctccgctcattgctccttgagccacacgctgacaaactggtccgcagttacagtgggggc
aacaagaggaagctgagtgcaggtatggctctgattggcgggccacctgtcatctttctg
gatgagccgtccactggcatggaccccgtggccagacgcttgctctgggatgcagtcaca
cgcaccagagaatctggcaaagccattattatcacctcacacagtatggaggagtgtgag
gctttgtgcactagactggctgtgatggtcaatggacagttcaagtgtctgggcagccca
cagcatctaaagagcaaatttggcagtggatacacactgttggccaaaatccacatggag
gctgatttagaggagatggaccttcagcactttaaagacttcatcgagagcatcttccct
ggtagcgtactgaaggatgaacatcagggaatggtacattatcatttgactgacaaaaca
ttaacctgggctcaggtttttgggacacttgaggcagctaaggagaaatatagcattgag
gactattgtgtgagtcagatctcactggagcaagttttcctgagctttgctcagttccag
cactgttcagaaggacagcggaaatcacactga
DBGET
integrated database retrieval system
