Ictalurus furcatus (blue catfish): 128625136
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Entry
128625136 CDS
T09387
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128625136
03015 mRNA surveillance pathway
128625136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128625136
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128625136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
128625136
NCBI-ProteinID:
XP_053509215
LinkDB
All DBs
Position
2:21514077..21522663
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AA seq
285 aa
AA seq
DB search
MAPSPTKRRERSEDKARERGKDKAVVKEGAEKERGRDKNRKRRSNSTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSASPSPSRRRHDNRRRSRSKSKS
QKRVDEKERKRRSPSPKPTKLHVGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRCHPNLS
RGYAYVEYETSEDAQKALKHMDGGQIDGQEITATAVLTQRMRPAPRRLSPPRRMPPPPPM
WRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcacctaccaaacgcagggagcggtcagaagataaagctcgagagaggggc
aaagataaagctgtggtgaaggaaggtgctgagaaagagcggggcagagacaagaaccgc
aagcgacgcagtaactccactgggagcagcagtagcaggtctaggtccagttccagctcc
agcagcagctctggttctagttcaggttcctcgagtggttccagctcctcttcaggctct
agtcgctctggctcatccagctcctcgcggtcctccagctcctctggctcctcggcatca
cccagcccgagcagacgtcgacatgacaatcgcagacggtcacgctcaaagtctaagtct
cagaagagagttgatgaaaaagaacggaaaaggaggagccctagccctaagcccaccaaa
ctccacgttggaagattgactaggaatgttaccaaggatcacattcaagagatcttcgct
acgtatgggaaaatcaaaatgattgatatgccatcagaccgatgtcatccaaacttgtca
agagggtatgcctatgtcgagtatgaaacttcagaggatgcccagaaggccctgaaacac
atggatggaggtcaaatagatggtcaagaaatcacagcaacagctgtcctgactcagagg
atgcgacctgcccctcgtaggctgtcccctccacgtaggatgcctcctcctccacccatg
tggcgccgtactccgcctcgcatgaggagaaggtctaggtcaccacgtcgccgttcccca
gtaagaagacgatctcgctcaagatctccaggtcgcagacgccatcgctcacgctccagc
tcaaactcctcacgatag
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