Ictalurus furcatus (blue catfish): 128625145
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Entry
128625145 CDS
T09387
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128625145 (ddx19b)
03015 mRNA surveillance pathway
128625145 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128625145 (ddx19b)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128625145 (ddx19b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128625145 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128625145
NCBI-ProteinID:
XP_053509221
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All DBs
Position
21:complement(15212243..15221599)
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AA seq
479 aa
AA seq
DB search
MATDSWAQAVDQQEAAAESISNLQLSEKEDKPKAEENGAKAEGEGEKTEEEEKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSNRWPQCLCVSPTYELALQTGK
VIEQMGRFYPEVQLVYAIRGNKLERGLKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEESVWNFAKRIIPDPNIIKLKRE
EETLDTIKQYYVMCDSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDADDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctacggattcctgggctcaggctgtggatcaacaagaagctgcagctgagtcgata
agcaaccttcaattaagtgaaaaggaagacaaaccaaaagcagaggaaaatggagccaag
gctgagggagaaggagagaagactgaggaggaagaaaaagaggacaaagcagctcagtcg
ctgttgaacaagttgatacgaagcaatctagtgaacaccaccaaccaagtggaagttctc
caaagggatccgaactctccgctttactcggtcaagtcgtttgaggagctgcgcttgaag
cctcagctacttcaaggtgtttatgctatgggcttcaacagaccctcgaaaatccaggag
accgccttgcccatgatgcttgcagaacccccacagaatcttatagcgcagtctcagtcg
ggtacaggtaaaactgccgcgttcgtcctggctatgctcagtcacgtggatcccagcaac
agatggcctcagtgcctgtgtgtgtcgcctacatacgagctcgccctccagacgggcaag
gtcatcgagcagatgggcagattttaccctgaagtccagctggtgtatgcaatccgagga
aacaaattggagagagggttgaagctccaggagcagattgtgatcggcactcctggcaca
gtcctggactggtgccaaaagctcaaattcatcgacccaaagaaaattaaagtgtttgtt
ctggatgaggcagacgtcatgatcgccacacagggtcaccaggaccaaagcattcgcatc
cagaggatgttgcctaaatcctgccagatgctcttgttctctgcaacgttcgaggagtct
gtgtggaacttcgccaagcggatcatccccgacccgaacatcatcaaactgaagagagag
gaggagacgctggacaccattaagcagtactatgtgatgtgcgacagcagggaggagaag
ttccacgccctgtgtaacatctacggtgccatcactatcgcacaggccatgatcttctgt
cataccaggaaaacagcggggtggctagcaggagagctgtctagggagggccaccaggtg
gcgctactcagcggcgagatgcaggtggaacagagagctgcggttattgagcgtttccgc
aatggcaaagagaaagtcctggtcactacaaacgtctgtgcccgaggtatcgatgtggag
caggtctcagtggttattaattttgatttacccgtggacaaggatggaaaccctgacaac
gagacgtacctgcaccggatcgggcgcactgggagatttggcaagcgaggtctggcgatc
aacatggtggacagcaggtttagcatgaacattctcaaccgcattcaggagcacttcaat
aagaaaattgaaaaactggacgcggacgatttggatgaaatcgagaaaatagcgaactga
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