Ictalurus furcatus (blue catfish): 128625182
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Entry
128625182 CDS
T09387
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu04141
Protein processing in endoplasmic reticulum
ifu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128625182 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128625182 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128625182 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128625182 (sec13)
04131 Membrane trafficking [BR:
ifu04131
]
128625182 (sec13)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128625182 (sec13)
Membrane trafficking [BR:
ifu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128625182 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128625182 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
128625182 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR19_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
128625182
NCBI-ProteinID:
XP_053509286
LinkDB
All DBs
Position
21:complement(5555904..5569937)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYDFGLIL
ACGSSDGAISILTYTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVGGQWACIS
DVNKGQGAVTSITDGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtcattaacaccgtggatacctcccatgaggatatgattcatgatgctcag
atggactactacggcacgagactggcgacctgctcctccgatcgatctgtgaagatcttt
gatgttaagaatggtggccagattcttgtggcagacctgaggggacatgaaggtccagtg
tggcaagtggcttgggcacatcccacctacggcaacatcctggcctcgtgctcctacgac
agaaaagtgatcatctggaaagaggaaaacgggacgtgggataagatgtacaagtacacg
ggccacaactcctcagtgaactctatttgctggggaccctatgacttcggtttaattctg
gcctgcggaagctctgacggtgccatctcgattctgacctacactggtgatgggcagtgg
gacatcaagaagatcaacaatgcccacactattggctgcaatgcagtgagctgggctcca
gctgttgttccaggcagcctcatagaccagcccacaggacagaaacccaactatgtgaag
agatttgtctctggaggttgtgacaacttggtcaagctttggaaagaggaggatggtcag
tggaaggaggaccagaagctggaggcccacagtgactgggtgagagatgtaggctgggct
ccgtctatcggtctacctaccagcacaattgccagctgctctcaggatggtcgcgtattc
atctggacatgtgatgatccctccggaaacacctggaccgctaaactcctgcacaaattc
aacgatgtagtttggcacgtcagctggtccatcacgggcaacatcctggccgtgtccgga
ggagacaacaaggtgaccctgtggaaggagtctgtgggcggacagtgggcttgcattagc
gatgtgaataaaggccaaggggccgtgacctccatcacagacggccagcagaacgagcag
tga
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