KEGG   Ictalurus furcatus (blue catfish): 128625182
Entry
128625182         CDS       T09387                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03013  Nucleocytoplasmic transport
ifu04141  Protein processing in endoplasmic reticulum
ifu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128625182 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128625182 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    128625182 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128625182 (sec13)
   04131 Membrane trafficking [BR:ifu04131]
    128625182 (sec13)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128625182 (sec13)
Membrane trafficking [BR:ifu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    128625182 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    128625182 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    128625182 (sec13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR19_1st NBCH_WD40
Other DBs
NCBI-GeneID: 128625182
NCBI-ProteinID: XP_053509286
LinkDB
Position
21:complement(5555904..5569937)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYDFGLIL
ACGSSDGAISILTYTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVGGQWACIS
DVNKGQGAVTSITDGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtcattaacaccgtggatacctcccatgaggatatgattcatgatgctcag
atggactactacggcacgagactggcgacctgctcctccgatcgatctgtgaagatcttt
gatgttaagaatggtggccagattcttgtggcagacctgaggggacatgaaggtccagtg
tggcaagtggcttgggcacatcccacctacggcaacatcctggcctcgtgctcctacgac
agaaaagtgatcatctggaaagaggaaaacgggacgtgggataagatgtacaagtacacg
ggccacaactcctcagtgaactctatttgctggggaccctatgacttcggtttaattctg
gcctgcggaagctctgacggtgccatctcgattctgacctacactggtgatgggcagtgg
gacatcaagaagatcaacaatgcccacactattggctgcaatgcagtgagctgggctcca
gctgttgttccaggcagcctcatagaccagcccacaggacagaaacccaactatgtgaag
agatttgtctctggaggttgtgacaacttggtcaagctttggaaagaggaggatggtcag
tggaaggaggaccagaagctggaggcccacagtgactgggtgagagatgtaggctgggct
ccgtctatcggtctacctaccagcacaattgccagctgctctcaggatggtcgcgtattc
atctggacatgtgatgatccctccggaaacacctggaccgctaaactcctgcacaaattc
aacgatgtagtttggcacgtcagctggtccatcacgggcaacatcctggccgtgtccgga
ggagacaacaaggtgaccctgtggaaggagtctgtgggcggacagtgggcttgcattagc
gatgtgaataaaggccaaggggccgtgacctccatcacagacggccagcagaacgagcag
tga

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