Ictalurus furcatus (blue catfish): 128625461
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Entry
128625461 CDS
T09387
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128625461 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128625461 (rorb)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128625461 (rorb)
Nuclear receptors [BR:
ifu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128625461 (rorb)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
128625461
NCBI-ProteinID:
XP_053509742
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Position
22:4439842..4479314
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AA seq
527 aa
AA seq
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MCSKRKAPFHSSLSSQRASVLTAFLKGPPVSKLLEKQCLGCEVALHYVSLYLTASDCVTL
SLSPSPFSLFLSAAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQTGDVYSSSLSTLGHDLGGAYTNGHVIDMAKTHANGAPAAYYSMDSTQPSPDQSGLDMA
GMKPIKQEPVYDLTPVPDLFPYNSYQDSQLAPGISMGELDRIAQNIIKSHLETCQYTGEE
LQQLSWQTHSYEEVKMYQSKSREALWQQCAIQITHAIQYVVEFAKRIAGFMELCQNDQIL
LLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGSIQMFKALGCDDLVSAMFDFAKSLCSLQ
LTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYLALQHIMQKNHMDEDALTKLIGRI
PTLAALCTLHTEELQAFQQLHPETVNMLFPPLYKELFNPDAASVMSK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcaaacgcaaggcaccttttcattcttccctctcctcgcagcgggcttcagtg
ttgacagcttttctgaaagggccacccgtgtcaaaattattagagaagcagtgtctcgga
tgtgaagtggcccttcattatgtcagcctttatctaactgcgagcgattgtgtaacactc
tctctctcaccttctcctttctctctctttctctcggcagcccaaattgaagtcatacca
tgcaaaatctgtggagacaagtcctcagggatccattatggggtcatcacatgtgaaggg
tgtaagggttttttcaggagaagtcaacagaacaacgcctcatactcatgccctcggcag
cgcaactgcctgatcgacagaaccaaccgtaaccgctgccagcactgccgtctgcaaaag
tgtctcgctctgggcatgtcacgtgatgcggtaaagtttggccgcatgtcgaagaagcag
cgtgactcgctgtatgccgaggtacagaagcaccagcagaggctgcaggaacagcggcag
cagcagacgggcgacgtttactcgtccagtctgagcactcttgggcacgacctgggtggt
gcctacaccaacggacacgtcattgacatggccaagacgcatgccaacggcgcacctgct
gcctactacagcatggactcaactcagccgagcccagaccagtccggactggacatggcg
ggcatgaagcccatcaaacaggagcctgtgtacgacctgacgcctgtgcccgacctcttc
ccctacaactcgtaccaggacagccagctagcacctggaatttctatgggggagcttgac
cgaattgcacagaacataataaagtctcatctggagacgtgccagtacacgggcgaagag
ctgcagcagctctcctggcagacacactcgtatgaggaggtcaagatgtaccaaagcaag
tcacgagaggcgctgtggcaacagtgtgcaattcagatcactcacgccattcagtatgtg
gtggagttcgccaaacgcatcgccggcttcatggaactgtgtcagaacgaccagatactg
ctgctcaaatcaggttgtctggaggtggtgttggtaagaatgtgcagagcgtttaaccct
ctcaacaacacggttctgttcgagggcaaatacggcagcattcagatgttcaaagcgctc
ggctgcgacgatctcgtcagcgccatgttcgactttgccaagagtctgtgctctctgcag
ctgacggaagaggagatcgcgttgttctccgcagccgttctcatctccacagatcgacct
tggctaatggaaccaaggaaagtccagaagctgcaagagaaaatatacttggccctccag
cacataatgcagaagaaccacatggacgaggacgcattgactaagctgattggtcggatc
cccacgctagcggcactgtgcaccctgcacacagaggagcttcaggccttccagcagtta
caccctgaaacagtcaacatgctcttccctccactttacaaggagcttttcaatcctgac
gcggccagtgtcatgtccaagtga
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