Ictalurus furcatus (blue catfish): 128625487
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Entry
128625487 CDS
T09387
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
ifu03420
Nucleotide excision repair
ifu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128625487 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
128625487 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ifu01001
]
128625487 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128625487 (cdk7)
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128625487 (cdk7)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128625487 (cdk7)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
128625487 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
128625487 (cdk7)
Protein kinases [BR:
ifu01001
]
Serine/threonine kinases: CMGC group
CDK family
128625487 (cdk7)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128625487 (cdk7)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
128625487 (cdk7)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128625487 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
Kinase-like
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128625487
NCBI-ProteinID:
XP_053509805
LinkDB
All DBs
Position
22:6840068..6856641
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTKNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNVSLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYLHHHWILHRDLKPNNLLLDESGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TSLPDYVSFKLFPGTPLEHIFSAASDDLLELLKGLFTFNPCTRLTATKALKMQYFSQKPA
PTPGPQLPRPNCSAEALKEKENLAIGIKRKRDVIEQGTLKKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctttggatgtcaagtccagagctaaacgatatgaaaagctggactttctcggagag
ggtcagtttgccacggtttacaaggcgagagacaaaacaaaaaataccattgttgcgatt
aaaaagattaaagtcggacacagaacagaggcaaaagatggaatcaacagaacagccctg
agagaaatcaaactgctgcaggaactgagtcatccaaatattattggactcctcgatgcg
ttcggacacaaatccaacgttagcctcgtgtttgactacatggagactgaccttgaggtt
atcataaaggacacgagtcttgtactgactccagccaacattaaagcctacatcctgatg
acactgcagggtctggagtacttgcaccatcactggatcctacacagggatttgaagcca
aataatttactactggatgaatccggggtgctgaaacttgctgattttggattggcaaaa
gcctttggaagtcctaacagagtttatacacatcaagtagtgaccagatggtaccgttct
ccagagctgctcttcggggccaggatgtatggggtgggtgtggacatgtgggcagtgggc
tgcatccttgcagaactcctactccgtgttccctttctggctggagattctgacctggat
cagctgacaaagatatttgaagcgctggggactccaacagaagagacttggcctgggatg
accagtctcccagattacgtctcatttaaactgtttcccggcacacctttggagcacatt
ttcagtgcggcaagcgacgaccttctggagctcctgaagggcctgtttactttcaacccc
tgcacccgcctcacagccacaaaggcattgaagatgcaatatttcagccagaaaccagcg
cccaccccaggccctcagcttccccggccaaactgttcagcggaagctctaaaagaaaaa
gaaaatctcgccattggcattaaaagaaaacgtgacgttatcgaacaaggcaccctgaag
aagaagttggtgttttag
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