Ictalurus furcatus (blue catfish): 128625542
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Entry
128625542 CDS
T09387
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128625542
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
128625542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
128625542
NCBI-ProteinID:
XP_053509920
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All DBs
Position
22:complement(15040294..15047500)
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AA seq
726 aa
AA seq
DB search
MWACPATLKVEKDAISEDVEHSVSTEEPPRKKKKREKTKEVNEAKELETQSNEKREEPPA
MKKEKKLKESQVNIAEERNEAPQVNLVVESETRSNKELEKKRKRKKTLKESEENIAEESK
ETEEVNLAMEAETRSNKELEKKRKRKKTLKESEENIAEESKETEEVNLAMEAETRSNKEL
EKKRKRKKTLKESEENVAEESKETEEVNLAVEAETRSNKELEKKRKRKKTLKESEENIAE
ESKETEEVNLAVEAETRSNKELEKKRKRKKTLKESEENIAEESKEMEEVNLAEEAETRSN
KELEKKKGKSKDKNRDSLEKKSLPNIKKKRTQGEKKEGPGIRKTALTVIDEKLLQQMKEF
IPDIESREVMNMSKMIKYDMPRFKEFKQQGISLNIGRFTVKENDRLRKNVKDFMALTAID
NPTKLFFTHRFKTEQENIKKLKVRHKFFERIAEGIPRSCYYIYARGRRMFDEKNYQGEFT
AAELHALNKLHTLHGSNWKKISELTGRSAMSLQKRYTQIADNEGPWSKKEVQRLLRAVRD
HVVSKIPGGADNYDSVRVTKEVLYKRLPLMKISKKVKTRSWTQCREKWMGILAMRMSFGT
LLSQKKSLDVQIKLIKGIYEMDIDDVAHVNWEDLTALIGDLPPTYIQRKWHKMKVCCVPN
WQKKSFGDIVDFMYETILPQLEQTLASCKGSDETQHNENQESYLLSNIFQDIEDDDDSSE
VNTQIM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtgtccagcaactttgaaagttgagaaagacgctatcagtgaggatgtagag
cactctgtaagtacagaagaaccccctagaaaaaagaaaaagagggagaagacaaaggaa
gtgaacgaagccaaggagttggagacacaaagcaatgaaaagagagaagaaccaccagct
atgaagaaggaaaagaagctgaaagagtcacaggtgaatattgcagaagagagaaatgag
gcaccgcaagtaaatttagtagtggagtcagagacacgaagcaacaaagaactggaaaag
aaaaggaaaaggaaaaagactctgaaagagtctgaggagaatattgcagaagagagtaag
gagactgaggaagtaaatttagcaatggaggcagagacacgaagcaacaaagaactggaa
aagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaagagagt
aaggagactgaggaagtaaatttagcaatggaggcagagacacgaagcaacaaagaactg
gaaaagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatgttgcagaagag
agtaaggagactgaggaagtaaatttagcagtggaggcagagacacgaagcaacaaagaa
ctggaaaagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaa
gagagtaaggagactgaggaagtaaatttagcagtggaggcagagacacgaagcaacaaa
gaactggagaagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgca
gaagagagtaaagagatggaggaagtaaatttagcagaggaggcagagacacgaagcaac
aaagaactggaaaagaagaaaggtaaatcaaaagacaagaatcgtgacagtttggaaaaa
aaatctcttccaaacatcaagaaaaagagaacacagggggaaaaaaaagagggcccagga
atccgaaaaacagcgttgactgtgattgatgaaaaacttttgcagcagatgaaagaattt
attcctgatatcgagtcaagggaggtgatgaacatgagtaaaatgatcaaatacgacatg
ccaagatttaaggaattcaaacaacaaggcatctctttgaatatcggacgtttcactgta
aaagaaaacgacaggctgaggaagaacgtcaaagacttcatggctctcaccgcaatagat
aaccccaccaagctgttcttcacacatcgctttaagacggaacaggagaatataaagaag
ctcaaagtgagacacaagttctttgaaaggatagcggaaggaattcccagatcctgctat
tatatttatgctcgtggaagaagaatgtttgatgagaaaaactaccagggagagtttaca
gcggcagaacttcacgcgttgaacaagttgcatactttacatggtagtaattggaagaag
atttcagagttgactggtcgaagtgcaatgtcactccagaaacgttacacacagattgct
gataacgaaggcccctggtccaaaaaggaggtacagagacttttgagagctgtacgagat
cacgtagtgagcaaaatcccaggtggagctgacaattacgactccgtaagagtgacgaag
gaagtgttgtataaaaggctccccttgatgaagatctctaagaaggtgaaaactcgttcg
tggactcagtgcagggagaaatggatgggtattttggcaatgagaatgtcctttggaacc
ttgctcagtcagaagaaatctctcgatgtccagatcaaactcataaaagggatatatgaa
atggatatcgacgatgttgcccatgtcaactgggaggacctaacagcactgattggggat
ctacctccaacgtacatccaaaggaaatggcacaaaatgaaagtgtgctgtgtgcctaac
tggcaaaaaaagagttttggagatattgttgactttatgtacgagaccatcttaccacag
ctggagcagacgctggcatcctgcaagggctctgatgagactcagcataatgaaaaccag
gagagctatcttctctcaaacatctttcaggacattgaggacgatgatgacagcagtgaa
gtgaatactcaaatcatgtga
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