Ictalurus furcatus (blue catfish): 128625596
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Entry
128625596 CDS
T09387
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03030
DNA replication
ifu03410
Base excision repair
ifu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128625596 (pole)
03410 Base excision repair
128625596 (pole)
03420 Nucleotide excision repair
128625596 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifu03032
]
128625596 (pole)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128625596 (pole)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128625596 (pole)
DNA replication proteins [BR:
ifu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
128625596 (pole)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
128625596 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
128625596
NCBI-ProteinID:
XP_053510024
LinkDB
All DBs
Position
22:complement(16824665..16859709)
Genome browser
AA seq
2286 aa
AA seq
DB search
MVLQNSGRYKSDRSGGADQDKQQDDVSNLSAVKRLERSQFTDEMDARYGFERMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKVALPYKPYFYIATKQNCEREVVSFL
SKKYQGKIAKLETVPKEDLDLHNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNRER
EKSNDAYTSMLSSALVGGSVMTADEDGTSKKMSDQLDNIVDMREYDVPYHIRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAALIQRWFEHIHETKPNIF
VTYNGDFFDWPFIEVRASHHNLNMYQEIGFQKDSQGEYKASQSIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAVEEEEKIPLEQVTNFTEV
CDDIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGKPRAFHELNREEQARHE
KKRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQENCDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSSNEKKPKVTISYPGAMLNI
MVKAGFTNDQYQELLDPASLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEVSVKKHFLRKWLKMPSLHDMDIRSILDWGYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISEMFTSEGKRQVANQT
EPGETPDMEDFRVPQRPLQPAILISTKRKRASQGEDSQTESQELELTQSWREILGPPPPM
GTTQEERLVWLRYHKKKWELQIRQRKERRKRRRMLDGEAQPTGGGVIRDGPTTGLGNFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGTDLHCMKLNIPRVFYVNQRVPKQEDGAT
YKKVNRILPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKQVVRALAGREADTFELDHLEMRSLAQFGYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASVFVLDTVRSNQMPNLSTLYGTERAALLEKTSEELLPPEKHLFEVRAEND
VKAIYRAVQRILLSYKEERRGPTLIAVQSNWELRRLAAGMAVLEEFPVVPVHVTDDISYS
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPEDISIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSVEINAPGCFSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASIGVSFDVIQHASLEDMMSGNQGATAVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPA
NYGGVKGNVPSSIMYGETGTDKTKKGMKEGDDEGSEDEEDEDDEAEEERDGEEDAVEDLI
ESSWNIMQYLPQAASCQKYFLMIISAYIAAVYHSMREELRRNAPGATPIKRRGGSQASQQ
PAGDVGALPGMITFSQEYVSSELTQNIFTITQKIQKKVCGTRSVAQPSEMFPVLPGSHLP
LNNPALEFIKYVCQVLSLDANIVHQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYVLPEV
ICHQCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTDSIEMALVEALRKKLMSYTL
QDLECVKCRGVKEANMPLYCSCAGDFSLTFSTKSFTEQVDVFRSIAAHYNMNFLLETIDW
ILRMSS
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggttttacagaacagcgggagatataaatcagaccggagtggaggagcagatcaggac
aagcagcaggatgacgtgtctaatttgtctgccgttaagagactcgagcgcagtcaattc
acggatgaaatggacgcccgctacggcttcgaacgcatgaaggagccgggagaaaaaacc
ggctggttgatcaacatgcatccgacggagattctggatgatgataagcggatgatcagc
gcagtggattattatttcattcaggaggacggcaacaggtttaaggtcgcactgccgtac
aaaccgtacttctacatcgccactaaacagaactgtgagagagaagtcgtctcgttttta
tcgaagaagtaccagggaaagatcgcgaagctcgagaccgttcccaaggaggatctggac
ctgcataaccacctagtgggactgaagaggaactacattaaactgtcctttaacacggtg
gacgatcttatcaaagtgaagcgggagatctcacctgctgtgaggaagaacagagagcgg
gagaaatccaacgacgcctacacgagcatgctgtccagcgcacttgtaggcggaagcgtg
atgacggccgacgaagatggcacgtctaagaaaatgtccgaccagctggacaacatcgtg
gacatgagggagtacgacgtgccttaccacattcgactgtccatcgacctcaagatccac
gtggcgcactggtataacgtgcggtacagaggaagcgcgtatcctccggagattgtgcgt
cgggatgaccttgtggaaagaccagatcccgtcgtcttggcgtttgatatcgagaccacc
aaactcccgctgaagtttccagacgcagaaaccgaccagatcatgatgatctcctacatg
atcgatgggcagggtttcctcatcaccaacagagagatcgtctccgaggacatcgaggat
ttcgagttcaccccgaagccggagtacgagggcccttttactgtgtttaacgaacctgac
gaggctgctctcattcagagatggttcgaacacatccatgagactaaacccaacattttc
gtcacctataacggagacttcttcgactggccgttcatagaggtgcgcgcctctcaccac
aacctcaacatgtatcaagagatcgggtttcagaaggacagccagggcgagtacaaggcc
agccagtctattcacatggactgcctcaggtgggtaaagagagacagctacctgcctgtc
ggaagccacaacctgaaagcagcagcgaaggccaagctgagttacgaccctgtggagttg
gacccggaggagatgtgccgcatggccaccgaggagccgcagactttggccacctactcg
gtgtcagatgctgtggctacctactatctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcattcccatggagcctgacgaggtgttgcgtaaaggttcagggact
ctgtgcgaggcgttgttgatggtccaggctttccacgccaacatcgttttcccgaacaag
caggagcaggtgttcaataagctcacggacgacggccacgtcctggactcggagacctac
gtgggcggccacgtcgaggctctggagtccggagtgttccgcagtgacatcccgtgccgc
ttcaaaatgaatccggcggcgttcgacttcctgcttcagagggtggagcggactctgcgt
catgccgtcgaagaagaggagaagatcccactggagcaagtcacaaactttaccgaggtt
tgtgatgacatcaagaagaagctgatctcattgaaggaagtgccaaacaggatcgagtgt
cctcttatttaccatctcgacgtaggcgccatgtatcccaacatcatcctcaccaacagg
ttgcagccgtctgccatggtcgatgaggcgacctgtgctgcgtgtgattttaataaacct
ggcgctacctgccagagaaggatggcctggcagtggagaggagagatcatgccggccagc
cgcagcgagttccaccgtattcagcagcagctggagtctgagaagttccctcctctgttt
cctaacggaaaaccgcgcgccttccacgagctcaaccgagaggagcaggctcggcacgag
aagaaacgtctgggagactactgccgaaaggcctataagaaggtgcacttgacaaggctg
gaagagagagtcactacgatatgtcagagagagaattccttctacgtggacacggtccga
gcgttccgagatcgccgctacgagtttaaaggactgcataaggtgtggaagaagaagctg
tctacggctcaagagaactgcgacgcagctgaagtgaagcgctgtaaaaatatggagatc
ctttacgagtctctgcagctcgcacataaatgcatcctcaattccttctacggttacgtc
atgagaaaaggagcgagatggtattccatggaaatggccggcattgtgtgtcacacggga
gccaacatcatcacccaggccagagagctgatcgaacagatcgggaggcctttagagctg
gacactgatggtatctggtgtgtcctgcctaactccttccctgagaactttgtcatcaag
tccagcaacgagaagaagcccaaagtgacgataagttaccccggggccatgctgaacatc
atggtcaaggcaggctttaccaacgatcagtaccaggagctgttggacccggcctcgctg
acgtacgagacgaggtccgagaacagcatcttcttcgaggtggatggaccgtacctggcc
atgatcctgcctgcatccaaagaggagggcaagaagttgaagaagagatacgccgtgttt
aacgaggacggctccctggctgagctgaagggtttcgaggtaaagaggagaggagagctc
cagctcattaagatcttccagtcgtcggtcttcgaggctttcctcaaaggcaccaccctg
gaggaagtctacgcatcggtcgccaaagtggcggactactggctggacgtgctgtacagc
aaggcagcgaacatgccggacgccgagctcttcgagctgatttcggaaaatcgctccatg
tcccggaagctggaagactacggcgagcagaagtccacttccatcagcaccgccaaacgt
ctggcggagttcctcggagaccagatggtgaaggacgcgggtctgagctgtcgctacgtc
atctctcgcaaacccgagggctctcctgttaccgagagggcaattcctctggctatattc
caggctgaagttagcgttaagaagcacttcctgcgcaaatggctgaagatgcccagcctc
catgacatggacatcagatcaatcctggactggggttactacatcgaaagattaggcagt
gccatacagaagatcatcaccattccagcagcactacagcaggtgaaaaacccagtgccg
cgagtgcgccatccagactggctgcataagaagcttctggaaaagaacgacatctacaaa
cagaagaaaatcagcgagatgttcaccagtgaaggaaagagacaggtggccaatcagacg
gagccgggcgagactcccgatatggaggattttagggttccacagcgccccctacagcct
gccatcctcatcagtactaagaggaagcgagcgtctcagggtgaggacagccagactgag
tctcaggagctggagctcacacagtcctggagagagatactgggtcctccgccacctatg
ggtacaacacaggaggagaggctggtgtggctgcgctaccataagaagaagtgggagctg
cagatccggcagaggaaagagcgcaggaagagacggcgcatgcttgacggagaagctcag
ccgaccggaggcggcgtgatcagggacggaccgacaacagggctagggaacttcctccgc
aggacggcccggagcattctagacatgccctggcaaatagtacagattgcagaaaccagt
cacccaggcctgtataagctgtgggcggtgatcggcactgacctgcactgcatgaagctt
aatatcccacgagtgttttatgtcaaccagagagtgcccaagcaggaagacggggccacg
tacaaaaaggtgaaccggattttgccgcgttccaacgtggtgtattacctgtaccagtac
tcagtgcctgaggacatgtatcaggaacacatcaatgagatcaacgcagacctttctgcc
ccagacatagagggcgtctacgagacacaggtgccgctgctattccgggcgctggtgcag
ctcggctgcgtgtgcatggtcaataagcaggtggtgagggcgctggctggccgagaggcc
gacaccttcgagctggatcacctggagatgaggtcgctcgctcagttcggctacctggag
ccaggcagcgtgagacacatctacctgtaccatcacagtcagggccacaaggctctgttc
ggcctcttcatcccctctcagcgcaaagccagcgtcttcgtcctcgacacggttcggagt
aaccagatgccgaacctgagcacgctgtacggaacggagcgcgccgcgctgttagagaag
acctcagaggagctgctgcctccagagaagcacctgttcgaagtgcgcgctgagaacgac
gtgaaggctatttaccgcgcagtgcagcgcattctgctcagctataaggaggagcgtcgc
ggtcccactctcatcgctgtgcagtctaactgggagctgcggcgtctggcggccggcatg
gccgtgctggaggagttccccgtggttcccgtgcacgtgaccgacgacatcagctacagc
gtgctggactggcaacggcacggcgcacgccgcatgatcaaacactacttaaacctggac
agctgtctttcacaggccttcgacatggcgaggtattaccacttgcctgtagggaacctg
cccgaggacatctccatatttggctcggacctctttctggctcgtcacttgcggaagcac
aaccacctgctgtggctttcacccacagcgagacccgacctcgggggcaaggaggccgac
gacagccgcctggtgatggagagcgacgagcggggctcggtggagatcaacgccccgggc
tgcttctctacagtgtgtgtggagttggacattcagagcttggcggtgaacaccatcctc
cagtcgcaacacgtaaacgacatggagggcggagccagcatcggcgtgagttttgatgtc
attcagcacgcatcgttggaggacatgatgtcaggaaaccagggcgcgaccgctgtggct
agttatgatgagactgcactctgctccaataccttcaggatcctgaagagtatggtagtt
ggctgggtgcgtgagatcacccagtaccataacgtgtacgcagataatcaggtgatgcac
ttctaccgctggctgcgctcccccagctcgctcctgtacgacccggcgctgcaccgcacc
ctgctcaacatgatgaagaagattttcctccagctggtcgctgagtttaagcggctcggt
tcctccgtggtctacgggaacttcaaccgcatcatcctcagtaccaagaaaaggcgcatc
gacgacgccatcgcctacgtggagtacatcaccaacagcatccattcacgagagatcttc
cactctctgtccatcaccttctcccgatgctgggagttcctgctgtggatggatccggcg
aactacggaggagtcaaagggaacgtgccctccagcatcatgtacggagagaccggtacg
gacaagacaaagaaaggaatgaaggaaggagacgatgagggcagtgaggatgaggaggat
gaagatgatgaagcagaggaagagcgagatggagaggaggatgcggtggaggacctgatt
gagagcagctggaacatcatgcagtacctgcctcaggctgcttcctgtcagaaatacttc
cttatgatcatctcagcgtacattgccgccgtgtatcacagcatgagggaggagctcagg
cgaaatgctcctggagccacgcccataaagaggcggggcggaagccaagcgtcccaacag
cctgccggtgacgtcggtgcacttcctggcatgatcacgttctctcaggagtacgtgtcg
agcgagctcacgcagaacatcttcaccatcacacagaagatccagaaaaaggtgtgcggg
acccgcagcgtggctcaaccgtctgaaatgttccccgtgctgccaggatcccatctgccc
ctcaacaaccccgctctggagttcatcaaatacgtctgtcaggttctctcgctggacgct
aacatcgtgcaccaggtgaacaagctgaagcgggatctcctgcgcttggtggacgtcggg
gagttctccgaggaggctcagttccgcgacccctgcaactcctacgtcctgccagaggtc
atctgccaccagtgcaacttctgccgtgatctcgacctctgcaaggacccttccgtagcc
caggacggttcggtcctgccgcagtggttctgctccaactgccaggcgcagtacgacacc
gactccatcgagatggctctagtggaggctctgaggaagaagctgatgagttacactctg
caggacctggagtgtgtgaaatgcagaggagtgaaggaagccaacatgcctctgtactgc
agctgcgcaggagacttcagtctcaccttcagcacaaagagcttcaccgagcaggtcgac
gtgttccgaagcatcgctgctcattacaacatgaacttcctgctggagaccatcgactgg
atcctgaggatgagcagttag
DBGET
integrated database retrieval system
