Ignatzschineria rhizosphaerae: MMG00_00875
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Entry
MMG00_00875 CDS
T08009
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ign03009
]
MMG00_00875
Enzymes [BR:
ign01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MMG00_00875
Ribosome biogenesis [BR:
ign03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MMG00_00875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UNM96455
LinkDB
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Position
complement(202589..204316)
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AA seq
575 aa
AA seq
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MKERLQKVLANLGLGSRREIEGWISEGRIRVNDEVAELGCQVDGTETVLLDGRRISIDSG
EQERRVLIYYKPEGEITTRHDPEGRPTIFDSLPRINDGRWITVGRLDINTQGLLLVTNDG
ELAHRLMHPSHELEREYAVRVIGEFTDEMAENMKNGIEFEDGLSKFEEILWSGGTGANFW
YHVTVKGGKNREVRRLWESQGLMVSRLIRIRYGNVELPKGLREGQFIDIDPEILKELVES
VGLEHQRVTLDEKTERQRSKARRIGGSQLDRRRELNRDHRGSQDARRHDGDRPFNRDNNR
GEGRSFDRDNNRDEGRPFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNR
GEGRSFNRDNNRGEGRPFNHDNNRGEGRSFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNR
GEGRPFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNRGEGRSFDRDNNRGEGRPFNRDNNR
GEGRSFNRDNNRGEGRSFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNRGEGRPFNRDNNR
GEGRSFGSQDSRRHNRDEKRTFNREDRFSPKRSRD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgtttacaaaaagttttagcgaacctgggtttgggttcacgccgagaaatc
gaaggttggattagcgaaggtcgtattagggtcaatgacgaagtcgctgagctcggatgc
caagtcgatggaacagagactgtcctcttagatggtcgtcgtatttctatcgatagcggc
gaacaagaacgtcgtgtcctcatctattacaaaccagaaggtgagattactactcgccat
gatcctgaaggtcgtccaacaatttttgacagtcttccccgcattaatgatggtcgctgg
attacggttggccgtctagatatcaatacacaaggtcttcttcttgttacaaacgatgga
gaacttgcgcatcgtttaatgcacccatctcatgaattagagcgtgaatatgctgttcgc
gtgattggtgaatttaccgatgaaatggccgagaatatgaaaaatggcatcgagtttgaa
gatggcctttctaaatttgaggagattctctggtcaggtggaactggtgcaaacttctgg
tatcacgtaactgttaaaggcggtaaaaaccgtgaggttcgccgtctttgggaatcacaa
ggtttaatggtttctcgtcttatccgtattcgttacggtaatgtagagttaccgaaaggt
cttcgtgaaggacaatttattgatattgatcctgaaatcttaaaagagcttgttgaatca
gttggccttgaacatcaacgtgtgacgcttgatgagaagacagaacgccaacgttctaaa
gcacgtcgcattggtggaagccaattagatcgtcgccgtgaattaaatcgcgatcatcgc
ggatctcaagatgcacgccgtcatgatggagaccgtccatttaatcgcgataacaatcgt
ggcgaaggccgttcttttgaccgtgacaacaatcgtgatgaaggccgtccgtttaaccgc
gacaacaatcgcggtgaaggtcgtccgtttaaccgtgacaacaatcgcggcgaaggtcgt
ccatttaatcgtgataataaccgtggcgaaggtcgtccatttaatcgtgacaacaatcgt
ggcgaaggccgttcatttaatcgcgacaacaatcgtggcgaaggtcgtccgtttaatcac
gataataaccgtggcgaaggccgttcatttaatcgcgacaacaatcgtggcgaaggtcgt
ccgtttaatcgcgataataaccgtggtgaaggtcgtccgtttaatcgcgacaacaatcgt
ggcgaaggtcgtccgtttaatcgcgacaacaatcgtggcgaaggtcgtccgtttaatcgc
gacaacaatcgtggcgaaggtcgtccgtttaatcgcgataataaccgtggcgaaggtcgt
tcttttgatcgcgataataaccgtggtgaaggtcgtccgtttaatcgcgacaacaatcgt
ggcgaaggccgttcatttaatcgcgacaacaatcgtggcgaaggtcgttcgtttaatcgc
gataataaccgtggcgaaggtcgtccgtttaatcgcgataataaccgtggtgaaggtcgt
ccgtttaatcgcgacaacaatcgtggcgaaggtcgtccgtttaaccgcgacaacaaccga
ggtgaaggtcgtagctttggatcacaagattcacgccgccataaccgagatgagaaacgc
actttcaatcgtgaagatcgcttttcaccaaaaagatcacgcgactaa
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