Ignatzschineria rhizosphaerae: MMG00_02045
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Entry
MMG00_02045 CDS
T08009
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MMG00_02045 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ign03400
]
MMG00_02045 (xseA)
Enzymes [BR:
ign01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MMG00_02045 (xseA)
DNA repair and recombination proteins [BR:
ign03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MMG00_02045 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Cupin_NOL9
Motif
Other DBs
NCBI-ProteinID:
UNM96669
UniProt:
A0ABY3X1B3
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All DBs
Position
457959..459332
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AA seq
457 aa
AA seq
DB search
MFNGTIGSVTQDPNAQSVYSVTSLNLAIKDQLEGSFFYCLVEGEVSNAAFPQSGHIYFNL
KDDGAVIKAVIWRSQAMMYRALIGSGQKVRVSGKITVYAPRGEYQLIVSRVEEAGKGDLY
LEFEALKKRLEADGLFDGALKKPIPKHPQKIGIITSNTAAALQDVLNVFTTHRPDIPLIL
YETKVQGAQAGEEIAAAIVKANQEAQVDLLLLVRGGGSIEDLWAFNEEIVARAIFESQIP
IITGVGHETDTTIADFVADLRAPTPSMAAKYSSQSRDELYQLLSEFEERLLNLMRIKYEG
TQRKLTALLHRLQVKEPKLQMQTFQSELKALQGRLRETLTLKITHTTFQIKSLQARLDIR
LLQTKIEKRQEQLLQLQQRLESSMLYKQKKWEQLVLQQIERLHLLSPLHTLLRGYSMTSN
DAGAVIKSVSQVSVNDELKVQVADGAIAVKVTDITLL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgggacgataggttcagtgactcaagatcctaatgcgcaatctgtttatagt
gtgacctctttaaatcttgctattaaagatcaattagaggggagctttttctattgcctt
gtagaaggtgaagtctcgaatgcggcatttccccaatctgggcatatctattttaattta
aaagatgatggtgctgttattaaggcggttatttggcgttcgcaagccatgatgtatcga
gctttaataggcagtgggcaaaaggtaagagttagtgggaaaataacagtttatgctcct
cgtggggaatatcaattaatcgtttctcgggtggaggaggcagggaaaggggatctatac
cttgagtttgaagcattaaaaaagagattagaagcagatgggttatttgatggcgcgctt
aagaagcctattcctaaacatcctcaaaaaattgggatcattacttctaatacggcagcg
gctttgcaagatgttttaaatgtttttacaacgcatcgtccggatattccgttaatactt
tatgaaacaaaagttcaaggagcgcaggcgggagaagagatagccgcagctattgttaaa
gccaatcaagaagcgcaggtagatcttttactcttagttcgtggtggcgggagtattgaa
gatctctgggcatttaatgaagagattgttgcaagagcaatatttgagtctcaaattcct
attattacgggcgttggccatgaaacagataccacaattgccgattttgttgcagattta
agagcgccgactccttctatggctgccaaatattcctcacaatctcgtgatgagctctat
cagctactctctgaatttgaggagcgcttactgaatttaatgcgtataaagtatgaaggg
actcagcgaaagttaaccgctctattacaccgattgcaggtaaaagaacctaagttgcag
atgcaaacctttcaatctgaattaaaagcattgcaagggcgccttcgagaaactttaacg
cttaaaataacgcatacaacttttcagataaagtctcttcaagcaaggcttgatataaga
ctacttcaaacgaagattgaaaaaaggcaagagcagttattgcaattacagcaaagatta
gaatcttctatgctttataagcaaaaaaaatgggagcagttggtgcttcagcaaatcgaa
aggttacatcttttaagccctcttcacacattactgcgaggatattcaatgacgagcaat
gatgccggggctgtgattaagagtgtttctcaagtttcggtgaatgatgaactaaaagtt
caggttgcagatggtgcaatcgccgtaaaagtcacagatattactctgctttaa
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