Ignatzschineria rhizosphaerae: MMG00_05005
Help
Entry
MMG00_05005 CDS
T08009
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign00020
Citrate cycle (TCA cycle)
ign00190
Oxidative phosphorylation
ign00650
Butanoate metabolism
ign00720
Other carbon fixation pathways
ign01100
Metabolic pathways
ign01110
Biosynthesis of secondary metabolites
ign01120
Microbial metabolism in diverse environments
ign01200
Carbon metabolism
Module
ign_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ign_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ign_M00149
Succinate dehydrogenase, prokaryotes
ign_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MMG00_05005 (sdhA)
00650 Butanoate metabolism
MMG00_05005 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MMG00_05005 (sdhA)
00720 Other carbon fixation pathways
MMG00_05005 (sdhA)
Enzymes [BR:
ign01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MMG00_05005 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
VbhA
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
UNM97212
UniProt:
A0ABY3X2V4
LinkDB
All DBs
Position
complement(1158575..1160377)
Genome browser
AA seq
600 aa
AA seq
DB search
MSNLKEYKDYKIQEHVYDVVVVGAGGAGLRATLGMAEKGLKTACVTKVFPTRSHTVAAQG
GVSAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCREAIPSILELEHYGLPFSRTED
GKIYQRPFGGMTTNFGEGQAQRTCAAADRTGHAMLHTLYQQSLKHNAEFYIEYFAIDLLM
DEGECRGVVAWDLAEGTMHVFRSQIVVLATGGYGRAYFSATSAHTCTGDGNGMVARAGLP
LQDMEFVQFHPTGIYGAGCLITEGVRGEGGYLTNSNGERFMERYAPNAKDLASRDVVSRS
MLIEIREGRGVGPKKDHIYLHLEHLGPEVIEERLPSIAESARIFADVDVRKEPIPVIPTV
HYNMGGVPTNYHGEVVTLKDGNPDFVVPGLMAIGEASCVSVHGANRLGSNSLLDLVVFGR
AAANRAAEILTPNADHKAMDDQKVIDILDRFDKIRYADGNISTAELRDKMQRAMQEDVAV
FRMQETLEDGVKRVDEAFKLFNDIKVHDRSLIWNSDLVETLELSNLLICAVATVKSAVNR
TESRGAHAREDYPNRDDVNWMKHTFAWIDENGDVKIDYRPVHTYTLTDEVAYIEPKERTY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttaaaagagtataaagattataaaattcaagagcacgtttatgacgttgtt
gttgtaggtgctggtggcgcaggtcttcgcgcaacacttggtatggcagaaaaaggttta
aaaacggcgtgtgtaactaaagtattcccaacccgttctcatacagttgcagcgcaaggt
ggtgtatcagccgcgcttggtaacatgggtgaagatgattggcgttggcacatgtatgac
acagtaaaaggttctgactggttaggtgaccaagatgcaatcgaatatatgtgtcgtgaa
gcaattccttcaattttagagcttgagcactatggtttaccattctcacgaactgaagat
ggaaagatctaccaacgtccatttggtggaatgaccacaaactttggtgaaggccaagcg
caaagaacttgtgcggcagctgacagaacgggtcatgcaatgttgcacacgctttatcag
caatcattaaaacacaatgcagaattctacattgaatacttcgcaatcgaccttttaatg
gatgaaggcgagtgccgcggagttgttgcttgggatttagcagaaggcaccatgcacgta
tttcgttcgcaaatagttgttcttgcaacaggtggttatggccgtgcgtacttctctgca
acatcagcacatacttgtacgggtgatggtaacggaatggtggctcgtgcaggtcttcca
cttcaagacatggagttcgtacaattccacccaacaggtatctatggtgcaggttgttta
atcacggaaggtgttcgtggtgaaggtggttatttaacaaactcaaatggcgagcgcttc
atggagcgttatgcaccaaatgcgaaagacttagcatcacgtgacgttgtttctcgttca
atgctgattgaaatccgtgaaggtcgtggagttggtcctaagaaagatcatatctatctt
caccttgagcatttaggtcctgaggtaatcgaagagcgtcttccaagtattgcagaaagt
gcaagaatctttgctgacgttgatgtccgtaaagagccaattccagtaattccaacggtt
cactacaacatgggcggtgttcctacgaactatcacggtgaagttgtgacgcttaaagat
ggtaaccctgattttgttgttcctggtttaatggcaattggtgaagcatcatgtgtttct
gttcatggtgcgaaccgtcttggttcaaactcacttcttgacttagtcgtatttggacga
gctgctgcaaaccgcgctgctgaaatcttaacgccaaatgcagatcacaaagcaatggat
gatcaaaaagtgattgatattttagatcgctttgacaaaattcgttacgcagatggtaat
atttcaacagctgaacttcgtgataaaatgcagcgtgcgatgcaagaagacgttgcggta
ttccgtatgcaagagacacttgaagatggtgttaaacgtgttgatgaagcatttaaatta
tttaatgacatcaaagtccacgatagaagtttaatctggaactcagacctagtagaaacg
cttgagctttctaaccttttaatctgtgctgttgctactgttaaatcagcggtcaatcgt
acagaatctcgtggtgcacatgcacgtgaagattatccaaatcgtgatgacgtgaattgg
atgaaacacacatttgcatggatcgatgaaaacggtgacgtgaagatcgattatcgtcct
gtccatacttatacattgacagacgaagttgcttatatcgaacctaaagaacgtacttac
taa
DBGET
integrated database retrieval system
