Ignatzschineria rhizosphaerae: MMG00_05955
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Entry
MMG00_05955 CDS
T08009
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MMG00_05955 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ign01007
]
MMG00_05955 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ign03016
]
MMG00_05955 (lysS)
Enzymes [BR:
ign01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MMG00_05955 (lysS)
Amino acid related enzymes [BR:
ign01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MMG00_05955 (lysS)
Transfer RNA biogenesis [BR:
ign03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MMG00_05955 (lysS)
Prokaryotic type
Other AARSs
MMG00_05955 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UNM97388
UniProt:
A0ABY3X3D0
LinkDB
All DBs
Position
complement(1366122..1367642)
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AA seq
506 aa
AA seq
DB search
MTKETVVNDHDQTENHLITERREKLAKIRKEKQVAFPNSFRKDTDAKSLHKQMEGLDREA
LKEKGKIVKMAGRIVAKRLFGKGGFASLRDQTGDIQIFVNIGLIGQEAFDDFTTWDVGDI
IAVEGEVSRSDKGELTVRANTLTLLTKSLRPLPDKFHGLTDVEARYRQRYLDLIMNEESR
ETFRKRNLILRTIRTFMDERRFEEVETPMMHSIPGGANAKPFVTHHNALDMEFYLRIAPE
LYLKRLVVGGMERVYEINRNFRNEGVSTRHNPEFTMMEWYWAYADYKDMMDMTDAMMKAI
ALSVNEGSAQVQYQGYTIDFSQPAERMTVQESIIKHCAEAKDYDLNTREGVAALADHFHI
KYDKENDCWGKIIMEIFDEKVEESLLQPTFITGYPLAVSPLARKNDENPLITDRFEYFIG
GREVGNGYSELNDAEDQHDRFISQVEDKDSGDDEAMHYDKEFVTALEYGMPPTAGEGIGI
DRLVMIFTDAPSIRDVLLFPHMRVRD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagactgtagtgaacgatcacgatcaaactgaaaatcatcttattacagag
cgccgtgaaaaacttgcgaagattcgtaaggagaaacaggttgcattcccaaatagcttt
agaaaagatactgatgcaaagtccctccataaacagatggaaggcttagatcgtgaagca
ctaaaggaaaagggaaagattgtgaagatggcaggtcgtatcgttgccaaacgtctcttt
ggtaaaggtgggtttgcaagccttcgtgatcaaactggggatattcaaattttcgttaat
attggtttaattggtcaagaagcatttgatgattttaccacttgggatgtcggcgatatt
atcgctgttgaaggggaagtctctcgctctgataagggtgagttaacggttcgtgcaaat
accttaacgcttttgacaaaatcacttcgtccactacctgataaatttcatggcttaaca
gatgtagaggcgcgttatcgtcagcgttatcttgatcttattatgaatgaagaatctcgt
gaaacgtttcgtaaacgtaatctgattcttcgcacgattcgtacctttatggatgagcgc
cgctttgaagaggtggaaacaccaatgatgcactctattccagggggggcaaatgcaaaa
ccatttgttacccatcataatgcgctggatatggagttttatttacgcatcgctcctgag
ctctatttaaaacgccttgttgttggtggtatggagcgtgtgtatgaaattaatagaaac
ttccgtaatgaaggggtttcaacgcgtcataacccagaatttactatgatggaatggtat
tgggcatatgctgattataaagatatgatggatatgaccgatgcgatgatgaaggccatt
gcattaagtgtgaacgaggggtcagcgcaggttcagtatcaaggttatactattgatttt
agtcagccagcagagcgcatgacggttcaagaatctattataaagcattgtgcagaagca
aaagattatgatcttaatacacgtgaaggtgttgctgcgctcgcagatcatttccatatc
aaatatgataaagaaaatgattgctggggtaagattattatggaaatttttgatgaaaaa
gtcgaagagagccttcttcaaccgacattcattacaggttatccattagcagtatcacca
cttgcgcgtaaaaatgatgaaaatccacttattacagatcgctttgagtattttattggt
gggcgagaagtgggtaacggttattcagagcttaatgatgcagaagatcagcatgaccgc
tttatctctcaagtggaagataaagattcaggggatgacgaagcgatgcattatgataaa
gagttcgttacagcgcttgaatatggtatgccgcctacagccggcgaagggattggtatt
gaccgtttagtgatgatctttacagatgcaccttcaattcgtgatgtacttttattcccg
catatgcgagttcgtgattaa
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