Ignatzschineria rhizosphaerae: MMG00_06125
Help
Entry
MMG00_06125 CDS
T08009
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ign03009
]
MMG00_06125
Enzymes [BR:
ign01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MMG00_06125
Ribosome biogenesis [BR:
ign03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MMG00_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RPN7_PSMD6_C
Motif
Other DBs
NCBI-ProteinID:
UNM97418
UniProt:
A0ABY3X3F8
LinkDB
All DBs
Position
1419703..1420695
Genome browser
AA seq
330 aa
AA seq
DB search
MKHSETFTITVPDHLNGQRIDAILPILHPNLSRSQAQKLIKSGDVLLNSEVPRPRDSVTT
DDVITLTIEETVEEAPIQAERIALDILFEDEDLMIINKPAGMVVHPGAGNNQSTLANALL
HHCPALADLERAGIVHRLDKETSGLLVIAKNAETEEALIEQFKERTPTRIYHALVIGELI
AGRTIDAPIGRNPYRRKHMWVTETDEEGNNDGKEAITHIRVQDRFRAHTLIEARLETGRT
HQIRVHMQHINYPIVGDSDYGARLKLPKKFGQHAENVLRGFKRQALHAFAIGITHPRTGE
ELYFEQAYPNDMATLIDAIREESIEYEQNN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattcagaaacttttacaattaccgtacccgatcatttaaatggccaacgtatt
gatgccattctcccaatcctacatccaaacctctctcgaagccaagcacaaaaactcatt
aaaagtggtgacgtacttctaaatagtgaagtgcctcgcccaagagatagcgtaacaacg
gatgatgttatcaccctaaccattgaagaaaccgttgaagaagcacctattcaagcagaa
agaatcgcacttgatatcctctttgaagatgaagatttaatgattattaataaacctgcc
ggcatggtcgtccatcctggtgcgggcaataatcaaagcacgcttgcaaatgcccttctt
catcactgccctgcacttgcggatttagagcgagcagggattgttcaccgtcttgataaa
gagacctcaggtttacttgtcattgctaaaaatgccgaaacagaagaagcgctcattgaa
caatttaaagagcgaacaccaacaagaatctatcatgcgcttgtcattggggagcttatt
gccggtagaaccattgatgctcctattggcagaaacccatatcgccgtaaacatatgtgg
gtgacagaaacggatgaagaaggaaataatgatggcaaagaagcgattacccatattcgc
gttcaagatcgctttagagcccatacgctcatcgaagcacgcttagaaactggccgtaca
catcaaattcgtgtgcatatgcaacatatcaattacccgattgtgggggatagtgattat
ggcgcgcgccttaagcttcctaagaaatttgggcaacatgcagaaaatgttcttcgcggc
tttaaacgccaagcccttcatgcttttgcaataggtattacccatcctcgtaccggcgaa
gagctctattttgaacaagcctaccccaatgacatggcaaccttaattgatgcaattcgc
gaagagagcattgagtatgagcaaaataattaa
DBGET
integrated database retrieval system
