Ignatzschineria rhizosphaerae: MMG00_06135
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Entry
MMG00_06135 CDS
T08009
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ign03016
]
MMG00_06135 (miaB)
Enzymes [BR:
ign01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MMG00_06135 (miaB)
Transfer RNA biogenesis [BR:
ign03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MMG00_06135 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UNM97573
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Position
1421756..1423099
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AA seq
447 aa
AA seq
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MSTAQYKNFYIQTQGCQMNEYDSKKMADSLKAFCNLNQTQELDSADVFILNTCSIREKAQ
EKVFSELGRWRKLKEENPHIVIAVGGCVASQEGEAIKKRAPFVDIIFGPQTLHRLPKMLN
DVWQGNGTQVDVSFPEIEKFDHLPKPRAEGVTAFVSIMEGCNKYCSFCIVPYTRGEEISR
PFIDVIGEIAALADQGVREVTLLGQNVNDYQGEMPDGKIGDLALLIEYVAEIAGIERIRY
TTSHPIAFSDRLIDAYARVPKLVSHLHLPVQSGSDHILMMMKRNHTVLEYKAKIKKLRAI
RPDISISTDLIVGFPGETAADFEATMKLVEDIHYDHSFSFIYSARPGTPAANLPDDVSME
EKKERLARLQAKLTEQANAISQGMVGTIQRILVDRPSRNNPKELSGRTENNRVVNFEAPQ
ELIGHFCDVLITDAQAFSLRGRLALEQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcacaatataaaaacttttatattcaaacccaaggctgccaaatgaatgag
tacgactcaaagaagatggcagattccttaaaagcattctgtaaccttaatcaaacgcaa
gaacttgattctgcagatgtgtttatcttaaatacctgctctatccgcgaaaaagcgcaa
gaaaaagtgttctcagaattggggcgctggcgtaaattgaaggaagaaaatccgcatatt
gttatcgctgtaggtggctgcgttgcctcacaagaaggcgaagccattaaaaaacgtgcg
ccatttgttgatattatcttcggaccacaaacacttcaccgcttaccgaaaatgctcaat
gatgtttggcaaggtaatggcacacaagtggatgtctctttcccggagattgaaaaattt
gaccacttaccaaaaccacgcgctgagggcgttactgcctttgtttcgattatggaaggc
tgtaataaatactgctctttctgcatcgttccttacactcgtggtgaagagatctcccgt
ccctttattgatgtgattggtgagattgcagcgcttgctgatcaaggcgttcgtgaagta
acgcttcttgggcaaaacgtaaatgattaccaaggggaaatgccggatgggaaaattggt
gatcttgcgctcttaattgaatatgtggcagaaattgccggcattgagcgtattcgctat
accacatcgcaccctatcgccttctcagatcgcttaatcgatgcttatgcgcgagttcct
aaacttgtatcgcatctgcatcttcctgtgcaatcaggttcagatcacatcttaatgatg
atgaaacgcaatcatactgttttagagtacaaagcaaaaattaaaaagcttcgtgctatt
cgccctgatatttcgatctccacagatttaatcgtcggtttccctggtgaaacggcagca
gactttgaagcaaccatgaaacttgtagaagatattcactacgatcactcatttagcttt
atctactcagcacgcccaggcacgccggcggcaaatcttcctgacgatgtctctatggaa
gagaaaaaggaacgtcttgcccgtttacaagcaaaactcacggagcaagctaatgcgatt
tctcaaggaatggtaggcactattcaacgaattttagtagatcgcccttctcgcaataac
cctaaagagttatcgggaagaacggaaaataaccgcgttgtgaactttgaagcaccacaa
gagctaattggtcacttctgcgatgtactcattaccgatgcgcaagcattttcacttcgt
gggcgcttagctctcgaacaatag
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