Ignatzschineria rhizosphaerae: MMG00_06640
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Entry
MMG00_06640 CDS
T08009
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ign01011
]
MMG00_06640
Enzymes [BR:
ign01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MMG00_06640
Peptidoglycan biosynthesis and degradation proteins [BR:
ign01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MMG00_06640
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_8
TraD
Motif
Other DBs
NCBI-ProteinID:
UNM97515
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Position
1536359..1538290
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AA seq
643 aa
AA seq
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MILFLNKMPLKPLSILLGTLLTLSQITIASEANEQQWFQIGKQAIIKKDWETYQSSREKL
LDSSLLPYLEFYYYQERIEESDPQEVLEFADKYANEPFANTLKIVLFKDRERKKNFQFIL
DNAQFANTLGLKCYLYNAQYQQSTLDLAEFQKSWENNLQLPSGCSTVEEFWLANNKDLSL
IIKKIDELLLIGRTARAKQLITSLPQEQQTYYNYFIDLLNNPSNLLEVSTFYPEGKALYA
KVLQKWSSQNSLQAGKGLNFAKQKDLLTKEDYITLRNRIAVFQAGRNDVVAPLEKILAIP
ADERDDQVIQWGFRLAAKRGDYPVALALLSGLSESALQEDVWRYWLGRTYAEVGDQEQAK
HYYELIQNEPSFYGFLAADALQHNYDGITNIANEQGNLFTNGLNARFSMGLLLAKVNEEY
FSRVKWREALNNSSKADQEAGSIAAFDEGFYNLSLQAAARARAAGGLPYRYPSAYVPIIE
QYSDDFITKPIVLGLIRQESLFHEKAKSPASAHGLMQLLIPTAEKMSSTLNESERESLYE
PDANIRYGVTYLRYLQESVGSCIPYILASYNAGPHNVKKWLPSEADSDIDIALWIETIPF
YETRGYVKNVLSNAVIYHTLNKEPKRLSEYLNCRVPQDNIAQQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgattctttttttgaataaaatgcctctaaagcccctttcgatactattgggcacactt
cttacactatcgcagataacgattgcgtctgaagccaatgaacaacaatggtttcaaatc
ggaaaacaagcaattatcaaaaaagattgggaaacctatcaatcttcacgagaaaaactc
cttgattcaagccttctaccctaccttgagttttactactatcaagaacgtattgaagag
agtgatccacaagaggttttagagtttgctgataaatatgccaatgagccctttgccaac
accttaaagattgtactttttaaagatcgagagcgtaaaaagaattttcaattcatcctt
gataatgctcagtttgccaacacccttggcttaaaatgttatctctataatgctcaatat
caacaatcaacgctcgatcttgctgaatttcaaaaatcttgggaaaataacctacaactc
ccttcaggttgcagcactgtggaagagttttggctagctaataataaagatctctcctta
attattaaaaagattgatgaactactactgataggtagaaccgcaagagccaagcaatta
ataacctctttgccgcaagagcaacaaacctattataactactttatcgacctactgaat
aaccctagcaatttgttagaagtgtcgaccttttatccagaaggcaaagcactttatgca
aaagtattgcaaaaatggtcaagccaaaactctttacaagccggcaaaggccttaatttt
gcaaagcagaaagatcttttaacaaaagaagattacatcacacttcgaaatcgtattgcc
gtttttcaagcagggagaaatgatgttgttgcaccgcttgaaaaaatcctcgccattcct
gctgatgaaagagatgatcaagtcattcaatggggctttaggcttgcggcaaaacgggga
gattatcctgttgcgctagcgcttttatcgggactctcagaaagtgcattacaagaagat
gtctggcgttattggttaggcagaacttatgcagaagtaggcgatcaggagcaagctaaa
cactattatgagcttattcaaaatgagccctctttttacggcttcttagccgctgatgcg
ctgcaacacaattacgatggcatcaccaatattgccaatgaacagggaaatttatttacc
aatggccttaatgctagattctccatgggattattattagcaaaagtcaatgaagagtac
tttagccgcgttaaatggcgtgaagcactcaacaatagtagtaaagccgatcaggaggct
gggagtatcgccgcatttgatgaaggcttttataacttaagcttacaagcagccgcaaga
gcaagagcggcgggtggcttaccttaccgttaccctagtgcatacgttcctatcatcgag
caatatagcgatgatttcattacaaaaccgattgttttaggcttaattcgccaagagagc
ctatttcatgaaaaagctaaatctcctgctagcgcccatggtttaatgcaattactgatt
cccactgctgaaaaaatgtcctcaaccctcaatgagagtgagcgagaatcgctttatgag
ccagatgccaatattcgctatggcgtcacttatcttcgttatttacaagagagtgttggc
agctgtattccttatattttagcaagctataatgccggtcctcacaatgtgaagaaatgg
cttcctagcgaagctgatagtgatattgatattgcgctttggatcgaaacaattcccttt
tatgaaactcgaggctatgtcaaaaatgtgcttagtaatgcggtgatctatcacacatta
aataaagagcctaaacgcttatcagagtacctcaattgtagagtgcctcaagataatatt
gctcagcaataa
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