Ignatzschineria rhizosphaerae: MMG00_07745
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Entry
MMG00_07745 CDS
T08009
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign00470
D-Amino acid metabolism
ign00550
Peptidoglycan biosynthesis
ign01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MMG00_07745 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MMG00_07745 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ign01011
]
MMG00_07745 (murD)
Enzymes [BR:
ign01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MMG00_07745 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ign01011
]
Precursor biosynthesis
Amino acid ligase
MMG00_07745 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UNM95128
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Position
complement(1779828..1781189)
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AA seq
453 aa
AA seq
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MFAVGSKHLVVGFGITGLSVVKALNRLGVEHVFAIDSRENPPNEAEISPFCEKLHTGSFE
STLLDECDYLWVSPGIAIATPELAKTIARLPAENVGGDIELFARVVRENLIAITGTNGKS
TVTTLVGSIFEAAGYDLYMGGNLGTPALDLWLQYCDRENHDKTPLFLLELSSFQLETTAS
LKADIGVILNLSPDHLDRYRDYQHYIDSKFRLLAQSQTIIIPSDEPEIDKALLKSDFQGF
SKTVRFSLTKDDQSQYWANLADKTIESTEKEAIYYGGTKLGGTHNILNIVSAVAIAETFG
VTAPAIKAGIESYKPLAHRSVFVREIDGVAYFNDSKATNLSSTKAAILGFSERKWLILGG
VTKGQDFASLQTLLLNNVAGVALIGLDYSTILPHIPNSIPVYESQTLEMALSTLKEQAEV
GDIILFSPACASFDQFKGFEHRGDVFESLVKAL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagtgggctcaaagcatttagttgttggatttggaattacagggctttccgtt
gttaaggcgttaaataggttaggtgttgaacatgtttttgccatcgattcgagagaaaat
cctcctaatgaggcggagatttcccctttttgtgagaagcttcatacgggctcttttgag
tctactttattagatgaatgtgattatctttgggtcagtcccggaattgctattgcaacc
ccagagcttgcaaagacgattgcaagattacctgcagaaaatgttggcggagatattgaa
ctttttgcaagagttgtcagagagaatcttatcgctattaccggcacaaatggtaaaagt
acggtgacaacgttagtaggctcaatttttgaagccgctggctatgatctttatatgggg
gggaatttaggtactccggcattagatctgtggcttcaatattgtgatcgagaaaatcat
gataaaacaccgctatttttgttggaattatctagttttcagttagaaacaacggcttct
ttaaaggctgatatcggggtgatcttaaatttatcgcccgatcatcttgatcgttatcgg
gattatcaacattatattgactctaaatttagattattagctcagtctcagacgattatt
atcccaagtgatgagccagagatcgataaagcgcttttaaaatcagattttcaaggtttc
tctaaaacagtgaggttttcattaactaaagatgatcaatcacaatattgggcgaattta
gccgataaaacgattgaaagtacggaaaaggaagcaatttattatgggggaaccaagtta
gggggaacgcataatattttgaatattgtctcagctgttgctattgcggaaacttttggt
gtaacagctcctgcaattaaagcgggtattgaaagttacaagcctttagcgcatcgttca
gtctttgtaagggagattgatggggttgcgtattttaacgattctaaagcaactaatctc
tcatccacaaaagcggctattttaggattttcagaacgtaaatggcttattttagggggc
gtcactaaggggcaggattttgcctcactacaaactttactcttaaataatgttgcaggc
gttgccttgattgggctcgattactcgacgattttaccgcatattcccaatagcattcct
gtgtatgaaagtcagacgcttgagatggcattaagtactctaaaagaacaggcagaggtt
ggggatatcattctattttcacctgcctgtgcgagctttgatcagtttaaggggtttgaa
catcggggagatgtttttgagtcacttgtaaaggcactttaa
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